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VETF-L
Euk-VirEastern_grey_kangaroopox_virus
VETF-L__YP_010085397__Eastern_grey_kangaroopox_virus__2042482
Identity
- Accession:
- YP_010085397 ↗
- Protein ID:
- VETF-L
- Kingdom:
- euk
Quality
81.1
mean pLDDT
Taxonomy
Bamfordvirae›
Nucleocytoviricota›
Pokkesviricetes›
Chitovirales›
Poxviridae›
Macropopoxvirus›
Eastern_grey_kangaroopox_virus
TaxID: 2042482
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 7-151
Domain cluster:
rep: early_transcription_factor_-VETF-_large_subunit__YP_009162477__Salmon_gill_poxvirus__1680908__D11-143
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF04441.20 best | Pox_VERT_large | 240.6 | 4.90e-71 | 100.0% | 20.3% |
D2
high
residues 180-270
D3
high
residues 376-458
Domain cluster:
rep: early_transcription_factor_large_subunit_VETF-L__YP_009046167__Penguinpox_virus__648998__D379-458
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF04441.20 best | Pox_VERT_large | 150.2 | 1.10e-43 | 100.0% | 11.8% |
D4
high
residues 471-600
Domain cluster:
rep: early_transcription_factor_-VETF-_large_subunit__YP_009162477__Salmon_gill_poxvirus__1680908__D487-623
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF04441.20 best | Pox_VERT_large | 185.9 | 1.70e-54 | 100.0% | 18.3% |
D5
medium
residues 152-179_271-375
Domain cluster:
rep: early_transcription_factor_82_kDa_subunit__YP_009329732__BeAn_58058_virus__67082__D167-188_236-251_265-357
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF04441.20 best | Pox_VERT_large | 201.2 | 3.90e-59 | 79.7% | 14.9% |
CATH (9)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2n01B00 | 2.60.40.2500 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.60 | 34.0 | 3.78e-01 | 70.7% | 69.8% |
| 2ltmA00 | 3.30.1370.70 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › Scaffold protein Nfu/NifU, N-terminal domain | 0.58 | 44.0 | 4.82e-01 | 85.7% | 99.1% |
| 2ltlA00 | 3.30.1370.70 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › Scaffold protein Nfu/NifU, N-terminal domain | 0.57 | 45.0 | 4.70e-01 | 82.7% | 90.8% |
| 2zfzD00 | 3.30.1360.40 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › | 0.57 | 34.0 | 4.23e-01 | 75.2% | 100.0% |
| 3hdiA01 | 3.30.830.10 | Alpha Beta › 2-Layer Sandwich › Cytochrome Bc1 Complex; Chain A, domain 1 › Metalloenzyme, LuxS/M16 peptidase-like | 0.56 | 42.0 | 3.64e-01 | 78.9% | 56.0% |
| 1nrjA00 | 3.30.450.60 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › | 0.54 | 34.0 | 3.28e-01 | 78.2% | 55.8% |
| 2plgA01 | 3.30.1460.10 | Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › | 0.53 | 38.0 | 3.85e-01 | 75.9% | 75.0% |
| 3a2eA00 | 3.30.430.20 | Alpha Beta › 2-Layer Sandwich › Killer Toxin P4; Chain A › Gnk2 domain, C-X8-C-X2-C motif | 0.52 | 28.0 | 3.07e-01 | 72.2% | 63.0% |
| 2z1pA01 | 2.60.40.1280 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.51 | 35.0 | 3.51e-01 | 70.7% | 86.9% |
ECOD (11)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5019170 | 331.1.1.0 ↗ | a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like | 0.73 | 50.0 | 5.42e-01 | 70.7% | 86.1% |
| 4985641 | 331.1.1.0 ↗ | a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like | 0.71 | 58.0 | 5.99e-01 | 85.0% | 92.8% |
| 4984104 | 331.1.1.0 ↗ | a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like | 0.71 | 58.0 | 6.08e-01 | 85.7% | 100.0% |
| 5005470 | 331.1.1.0 ↗ | a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like | 0.69 | 50.0 | 5.72e-01 | 75.2% | 100.0% |
| 4982639 | 331.1.1.0 ↗ | a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like | 0.68 | 55.0 | 5.88e-01 | 84.2% | 99.1% |
| 5027198 | 331.1.1.1 ↗ | a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like › TBP | 0.68 | 47.0 | 5.15e-01 | 73.7% | 85.5% |
| 5017789 | 331.1.1.26 ↗ | a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like › Fer4 | 0.66 | 47.0 | 4.55e-01 | 72.9% | 77.3% |
| 5038272 | 306.2.2.1 ↗ | a+b two layers › Glucose permease domain IIB-like › arginine repressor C terminal domain-related › Hypothetical protein SAV1430 › Nfu_N | 0.64 | 42.0 | 5.05e-01 | 75.2% | 100.0% |
| 3956463 | 321.1.1.0 ↗ | a+b two layers › Glutamine synthetase-like › Glutamine synthetase/guanido kinase › Glutamine synthetase/guanido kinase | 0.59 | 40.0 | 3.24e-01 | 70.7% | 97.6% |
| 4994625 | 5104.1.1.1 ↗ | a+b three layers › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › DHHA1 | 0.55 | 39.0 | 3.94e-01 | 72.9% | 87.4% |
| 4076034 | 5104.1.1.1 ↗ | a+b three layers › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › DHHA1 | 0.51 | 36.0 | 3.67e-01 | 72.9% | 86.2% |
D6
medium
residues 610-702
Domain cluster:
rep: putative_A7L_protein__YP_010085794__Orthopoxvirus_Abatino__2478919__D613-700
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF04441.20 best | Pox_VERT_large | 112.8 | 2.20e-32 | 100.0% | 13.1% |