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VETF-small_subunit

Euk-Vir

Sea_otter_poxvirus

VETF-small_subunit__YP_009480620__Sea_otter_poxvirus__1416741

Identity

Accession:
YP_009480620 ↗
Protein ID:
VETF-small_subunit
Kingdom:
euk

Quality

84.0 mean pLDDT

Taxonomy

Bamfordvirae› Nucleocytoviricota› Pokkesviricetes› Chitovirales› Poxviridae› Mustelpoxvirus› Sea_otter_poxvirus

TaxID: 1416741

Cluster

View cluster (106 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-226
PDB
Domain cluster: rep: NC_074643__YP_010772404.1__QIT40-gp03__00003__D149-351
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF04851.22 best ResIII 33.5 5.50e-08 68.8% 96.3%
D2 high residues 533-608
PDB
Domain cluster: rep: morph,_VETF-s_early_transcription_factor_small__YP_008004589__Choristoneura_rosaceana_entomopoxvirus_L__1293539__D579-656
D3 medium residues 227-373_453-491
PDB
Domain cluster: rep: Early_transcription_factor_small_subunit_-VETF-s-__YP_009408039__Eptesipox_virus__1329402__D226-250_324-490
ECOD (1)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4669000 2004.1.1.30 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Helicase_C 0.53 47.0 4.04e-01 95.7% 93.1%
D4 medium residues 374-452
PDB
Domain cluster: rep: 70kDa_small_subunit_of_early_gene_transcription_factor_VETF__YP_232993__Vaccinia_virus__10245__D386-464
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF00271.38 best Helicase_C 33.4 6.40e-08 100.0% 61.8%