VITF-3_large_subunit

Euk-Vir

Akhmeta_virus

VITF-3_large_subunit__YP_010085602__Akhmeta_virus__2200830

Identity

86.6 mean pLDDT

Bamfordvirae› Nucleocytoviricota› Pokkesviricetes› Chitovirales› Poxviridae› Orthopoxvirus› Orthopoxvirus_akhmetapox

TaxID: 2200830

View cluster (34 members)

Download PDB Download Scores JSON

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 22-74_214-245

PDB

Domain cluster: rep: VITF-3_45kda_subunit_-Cop-A23R-__YP_008004520__Choristoneura_rosaceana_entomopoxvirus_L__1293539__D23-101_197-266

Pfam (2)

Accession	Name	Score	E-value	Q cov	HMM cov
PF05718.18 best	Pox_int_trans	70.3	1.80e-19	62.4%	13.9%
PF05718.18	Pox_int_trans	44.5	1.30e-11	38.8%	8.4%

D2 medium residues 75-109_187-213

PDB

Domain cluster: representative

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF05718.18 best	Pox_int_trans	47.8	1.30e-12	45.2%	7.1%

CATH (1)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
1fthA00	3.90.470.20	Alpha Beta › Alpha-Beta Complex › Ribosomal Protein L22; Chain A › 4'-phosphopantetheinyl transferase domain	0.52	41.0	3.49e-01	93.5%	92.3%

ECOD (1)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3919204	5054.1.1.2 ↗	alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › Ion_trans	0.50	40.0	2.24e-01	100.0%	41.0%

D3 medium residues 110-186

PDB

D4 medium residues 297-381

PDB

Domain cluster: rep: putative_intermediate_transcription_factor_VITF-3__YP_009112839__Parapoxvirus_red_deer_HL953__1579460__D300-378

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF05718.18 best	Pox_int_trans	136.7	1.20e-39	98.8%	22.0%