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VLTF-3
Euk-VirRaccoonpox_virus
VLTF-3__YP_009143428__Raccoonpox_virus__10256
Identity
- Accession:
- YP_009143428 ↗
- Protein ID:
- VLTF-3
- Kingdom:
- euk
Quality
73.0
mean pLDDT
Cluster
View cluster (35 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 39-147
Domain cluster:
rep: late_transcription_factor_VLTF3-like_protein__YP_009162472__Salmon_gill_poxvirus__1680908__D103-159
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF04947.20 best | Pox_VLTF3 | 100.6 | 1.10e-28 | 100.0% | 66.1% |
D2
medium
residues 148-200
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF04947.20 best | Pox_VLTF3 | 55.8 | 6.60e-15 | 96.2% | 30.4% |
CATH (2)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1zxjA01 | 1.10.3120.10 | Mainly Alpha › Orthogonal Bundle › Trigger factor, domain 2 › Trigger factor, C-terminal domain | 0.65 | 48.0 | 3.26e-01 | 79.2% | 41.1% |
| 3f4lA02 | 3.30.360.10 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 | 0.52 | 38.0 | 2.59e-01 | 81.1% | 87.0% |
ECOD (7)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| None | — | 0.76 | 66.0 | 3.70e-01 | 98.1% | 22.8% | |
| 4487482 | 2004.1.1.5 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ABC_tran | 0.71 | 52.0 | 3.21e-01 | 88.7% | 14.6% |
| 3777150 | 3291.1.1.125 ↗ | alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › zf-B_box | 0.68 | 50.0 | 3.76e-01 | 79.2% | 35.2% |
| 3984673 | 101.1.1.99 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › DUF4096 | 0.62 | 52.0 | 4.56e-01 | 100.0% | 83.5% |
| 4664482 | 101.1.1.99 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › DUF4096 | 0.56 | 46.0 | 4.11e-01 | 96.2% | 64.0% |
| 3578362 | 101.1.1.4 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › PAX | 0.56 | 47.0 | 4.28e-01 | 100.0% | 96.0% |
| 4000471 | 3922.1.1.0 ↗ | alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 | 0.55 | 47.0 | 3.33e-01 | 94.3% | 30.9% |