VLTF

Euk-Vir

Western_grey_kangaroopox_virus

VLTF__YP_010085186__Western_grey_kangaroopox_virus__1566307

Identity

86.2 mean pLDDT

View cluster (28 members)

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high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 88-182

PDB

Domain cluster: rep: CPXV090_protein__NP_619877__Cowpox_virus__10243__D88-174

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF05796.19 best	Chordopox_G2	64.7	1.20e-17	100.0%	40.0%

D2 medium residues 1-65

PDB

Domain cluster: rep: putative_transcriptional_elongation_factor__YP_009447997__Flamingopox_virus_FGPVKD09__2059380__D3-70_206-223

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF05796.19 best	Chordopox_G2	69.4	4.50e-19	100.0%	29.8%

D3 medium residues 186-239

PDB

Domain cluster: representative

CATH (6)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3sfvB01	3.30.450.390	Alpha Beta › 2-Layer Sandwich › Beta-Lactamase ›	0.62	48.0	3.56e-01	85.2%	97.9%
7ztbB01	3.30.460.10	Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2	0.62	45.0	3.27e-01	79.6%	93.9%
1sg6A02	1.20.1090.10	Mainly Alpha › Up-down Bundle › Dehydroquinate synthase-like, alpha domain › Dehydroquinate synthase-like - alpha domain	0.56	47.0	3.30e-01	100.0%	37.6%
3besR03	6.10.140.1480	Special › Helix non-globular › Helix Hairpins ›	0.55	43.0	4.28e-01	87.0%	92.9%
4qdjA00	3.40.50.150	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39	0.53	45.0	3.05e-01	98.1%	36.5%
3akjA02	1.10.1070.20	Mainly Alpha › Orthogonal Bundle › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, Domain 5 ›	0.52	43.0	3.07e-01	100.0%	58.7%

ECOD (5)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4145352	3455.1.1.0 ↗	alpha arrays › WY-domain in RXLR effectors › WY-domain in RXLR effectors › WY-domain in RXLR effectors	0.65	51.0	4.53e-01	90.7%	57.6%
3459724	604.1.1.102 ↗	alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › DUF8324	0.65	49.0	3.91e-01	83.3%	70.4%
3215889	109.4.1.1505 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › ARM_FBXO47	0.62	53.0	3.32e-01	96.3%	44.6%
4445312	3812.1.1.0 ↗	alpha bundles › Type III secretion protein YscE › Type III secretion protein YscE › Type III secretion protein YscE	0.60	41.0	4.22e-01	77.8%	76.0%
4017561	206.1.1.1 ↗	a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase	0.58	47.0	2.92e-01	90.7%	47.3%