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VLTF

Euk-Vir

Eastern_grey_kangaroopox_virus

VLTF__YP_010085350__Eastern_grey_kangaroopox_virus__2042482

Identity

Accession:: YP_010085350 ↗
Protein ID:: VLTF
Kingdom:: euk

Quality

86.3 mean pLDDT

Taxonomy

Bamfordvirae› Nucleocytoviricota› Pokkesviricetes› Chitovirales› Poxviridae› Macropopoxvirus› Eastern_grey_kangaroopox_virus

TaxID: 2042482

Cluster

View cluster (28 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 88-182

PDB

Domain cluster: rep: CPXV090_protein__NP_619877__Cowpox_virus__10243__D88-174

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF05796.19 best	Chordopox_G2	64.9	1.00e-17	100.0%	40.0%

D2 medium residues 1-65

PDB

Domain cluster: rep: putative_transcriptional_elongation_factor__YP_009447997__Flamingopox_virus_FGPVKD09__2059380__D3-70_206-223

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF05796.19 best	Chordopox_G2	68.2	1.00e-18	100.0%	29.8%

CATH (15)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3fdqA01	1.20.120.1030	Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Motility repressor MogR, DNA-binding domain	0.66	44.0	3.64e-01	70.8%	41.0%
4rg9B01	1.25.40.10	Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain	0.63	43.0	3.27e-01	89.2%	28.7%
3mq1A01	1.20.58.970	Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 ›	0.62	47.0	4.19e-01	81.5%	90.2%
1a7eA00	1.20.120.50	Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Hemerythrin-like	0.62	46.0	3.77e-01	80.0%	63.6%
1sumB02	1.20.58.220	Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphate transport system protein phou homolog 2; domain 2	0.61	49.0	4.06e-01	89.2%	80.5%
1c1kA02	1.10.220.50	Mainly Alpha › Orthogonal Bundle › Annexin V; domain 1 › Bacteriophage T4, Gp59, helicase assembly protein, C-terminal domain	0.60	50.0	4.31e-01	100.0%	69.6%
3uo2B02	1.20.1280.20	Mainly Alpha › Up-down Bundle › Monooxygenase › HscB, C-terminal domain	0.59	43.0	3.97e-01	78.5%	92.9%
3h5qA01	1.20.970.10	Mainly Alpha › Up-down Bundle › Transferase, Pyrimidine Nucleoside Phosphorylase; Chain A, domain 3 › Transferase, Pyrimidine Nucleoside Phosphorylase; Chain C	0.59	47.0	4.61e-01	90.8%	94.3%
2b6cA02	1.25.40.290	Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › ARM repeat domains	0.57	44.0	4.00e-01	89.2%	62.9%
3go2A01	3.30.390.10	Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain	0.53	39.0	3.30e-01	80.0%	79.8%
1n93X01	1.10.3040.10	Mainly Alpha › Orthogonal Bundle › borna disease virus nucleoprotein, domain 1 › borna disease virus nucleoprotein, domain 1	0.53	41.0	3.00e-01	89.2%	90.4%
4izzB02	1.10.10.1680	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › HetR, N-terminal DNA-binding domain	0.52	36.0	3.58e-01	70.8%	70.6%
3whjA00	6.10.140.1710	Special › Helix non-globular › Helix Hairpins ›	0.52	40.0	3.41e-01	86.2%	72.1%
2yfaA02	1.20.1440.210	Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) ›	0.52	37.0	3.18e-01	78.5%	58.6%
1ax8A00	1.20.1250.10	Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; ›	0.51	42.0	3.52e-01	100.0%	75.4%

ECOD (7)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4964824	101.1.6.44 ↗	alpha arrays › HTH › HTH › TrpR › HVO_2833_C	0.67	56.0	4.85e-01	96.9%	79.0%
3972132	601.33.1.0 ↗	alpha bundles › Four-helical up-and-down bundle › CHAD domain › CHAD domain	0.65	50.0	3.76e-01	81.5%	57.9%
54604	601.14.1.0 ↗	alpha bundles › Four-helical up-and-down bundle › Hemerythrin › Hemerythrin	0.62	46.0	3.76e-01	78.5%	62.7%
3612915	604.1.1.0 ↗	alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat	0.61	48.0	4.07e-01	84.6%	82.9%
3472879	622.4.1.0 ↗	alpha bundles › YvfG-like › Mite allergen Der p 5-related › Mite allergen Der p 5-related	0.58	47.0	4.15e-01	87.7%	71.6%
4274766	142.1.1.3 ↗	alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors › Sigma70_r2	0.56	43.0	3.69e-01	83.1%	74.3%
3179188	5050.1.1.0 ↗	alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter	0.54	37.0	3.10e-01	73.8%	57.7%