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VP0_protein

Euk-Vir

Rhimavirus_A

VP0_protein__YP_009553697__Rhimavirus_A__2218594

Identity

Accession:
YP_009553697 ↗
Protein ID:
VP0_protein
Kingdom:
euk

Quality

58.7 mean pLDDT

Taxonomy

Orthornavirae› Pisuviricota› Pisoniviricetes› Picornavirales› Picornaviridae› Rhimavirus_A

TaxID: 2218594

Cluster

View cluster (2 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 179-353
PDB
Domain cluster: rep: structural_polyprotein__YP_009333175__Bastrovirus-like_virus_VietNam_Bat_17819_21__1906170__D141-305
Pfam (2)
AccessionNameScoreE-valueQ covHMM cov
PF00915.27 best Calici_coat 26.6 3.90e-06 91.4% 41.1%
PF00073.27 Rhv 74.9 8.70e-21 86.3% 81.3%
CATH (94)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1fmd200 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.93 84.0 7.63e-01 100.0% 74.3%
5j98B00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.92 89.0 7.56e-01 100.0% 76.5%
3napB00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.89 84.0 7.26e-01 98.9% 68.8%
1b35B00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.89 84.0 7.24e-01 98.9% 67.5%
5mqcB00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.88 83.0 7.36e-01 98.9% 73.2%
1tme200 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.88 85.0 7.31e-01 100.0% 81.6%
4qpiB00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.88 85.0 7.77e-01 100.0% 90.8%
5c8cB00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.87 84.0 6.92e-01 100.0% 68.5%
5mqcC00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.86 82.0 6.98e-01 98.9% 74.6%
4qpiC00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.86 81.0 7.11e-01 98.9% 76.0%
3napC00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.86 82.0 6.84e-01 99.4% 86.6%
2ws9201 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.86 83.0 7.93e-01 100.0% 89.7%
1b35C00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.85 82.0 6.76e-01 99.4% 69.5%
1ihmB01 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.85 79.0 7.23e-01 100.0% 77.7%
4rft000 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.85 74.0 7.69e-01 100.0% 96.9%
2gh8A01 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.84 77.0 7.24e-01 98.9% 81.7%
7dodB01 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.84 78.0 7.50e-01 100.0% 87.6%
3vbhC00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.82 77.0 6.83e-01 98.9% 77.7%
5aooC00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.82 77.0 7.08e-01 98.9% 78.6%
3jb4C00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.82 77.0 6.80e-01 98.9% 71.4%
4nwvA01 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.81 74.0 7.26e-01 100.0% 89.7%
2ws9300 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.81 76.0 6.89e-01 98.9% 78.8%
2ztnA01 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.81 77.0 7.46e-01 100.0% 95.8%
5ewnA01 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.80 76.0 7.46e-01 99.4% 96.7%
3cjiB00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.80 75.0 6.65e-01 98.9% 79.0%
5k0uB00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.80 75.0 6.68e-01 98.9% 77.0%
1opoC01 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.80 71.0 7.29e-01 100.0% 98.2%
1tme300 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.79 74.0 6.69e-01 98.9% 78.3%
5yl1A01 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.78 74.0 7.35e-01 99.4% 100.0%
6jhsA00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.78 74.0 6.34e-01 100.0% 89.2%
1a6cA01 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.78 70.0 5.46e-01 96.0% 47.7%
4llfD01 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.77 70.0 7.03e-01 100.0% 93.3%
6aj3B00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.77 70.0 7.18e-01 92.6% 100.0%
7chkB01 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.77 57.0 6.50e-01 92.6% 100.0%
5aca300 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.77 72.0 6.59e-01 98.9% 78.4%
2tbvA00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.76 69.0 5.71e-01 100.0% 57.7%
6mrmC01 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.76 67.0 6.89e-01 97.1% 96.4%
6eiwA01 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.76 70.0 6.81e-01 98.3% 100.0%
4rs5A00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.75 70.0 6.44e-01 99.4% 82.4%
1mec100 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.74 70.0 5.91e-01 99.4% 80.3%
1auyB00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.74 63.0 6.12e-01 100.0% 82.0%
1pgw200 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.74 69.0 5.42e-01 100.0% 50.1%
1smvC00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.74 70.0 6.38e-01 100.0% 85.1%
1e57B00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.74 61.0 6.09e-01 100.0% 84.2%
1cov100 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.73 68.0 5.83e-01 99.4% 69.1%
6sk6A00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.73 68.0 5.75e-01 98.9% 69.6%
1ng0C00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.73 69.0 6.33e-01 100.0% 84.9%
2y26A01 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.73 66.0 5.26e-01 100.0% 50.0%
1f15B00 2.60.120.530 Mainly Beta › Sandwich › Jelly Rolls › Cucumovirus coat protein, subunit A 0.72 58.0 5.63e-01 97.1% 76.3%
1f2nC00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.72 69.0 6.39e-01 100.0% 84.4%
5jzgA00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.72 65.0 5.93e-01 98.9% 73.5%
1a6cA02 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.72 62.0 6.39e-01 97.1% 95.8%
4fy1100 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.72 68.0 6.27e-01 100.0% 82.9%
1bev100 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.72 67.0 5.73e-01 98.9% 66.8%
3jb8A00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.72 67.0 6.64e-01 99.4% 95.1%
3cjiA00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.72 67.0 5.81e-01 99.4% 84.9%
3napA00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.68 63.0 5.40e-01 98.9% 68.9%
1yq5A00 2.60.120.670 Mainly Beta › Sandwich › Jelly Rolls › Minor capsid protein. 0.66 52.0 5.70e-01 95.4% 100.0%
1pk6C00 2.60.120.40 Mainly Beta › Sandwich › Jelly Rolls › 0.66 47.0 5.38e-01 96.0% 99.2%
3a21A03 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.65 38.0 4.74e-01 94.3% 98.0%
4d7yA00 2.60.120.40 Mainly Beta › Sandwich › Jelly Rolls › 0.64 47.0 5.33e-01 98.3% 100.0%
2df7A02 2.60.120.660 Mainly Beta › Sandwich › Jelly Rolls › icosahedral virus 0.64 49.0 5.45e-01 98.3% 100.0%
4h3wA02 2.60.120.1260 Mainly Beta › Sandwich › Jelly Rolls › 0.64 51.0 5.40e-01 96.0% 94.7%
4devD01 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.63 43.0 5.03e-01 91.4% 97.6%
4oumA00 2.60.120.40 Mainly Beta › Sandwich › Jelly Rolls › 0.63 46.0 5.21e-01 98.3% 100.0%
1o91A00 2.60.120.40 Mainly Beta › Sandwich › Jelly Rolls › 0.62 45.0 5.08e-01 98.3% 100.0%
6mkbA00 2.60.120.40 Mainly Beta › Sandwich › Jelly Rolls › 0.60 51.0 5.36e-01 98.9% 99.4%
2rg4A01 2.60.120.620 Mainly Beta › Sandwich › Jelly Rolls › q2cbj1_9rhob like domain 0.60 39.0 3.82e-01 97.1% 58.8%
4msvA01 2.60.120.40 Mainly Beta › Sandwich › Jelly Rolls › 0.59 45.0 4.99e-01 96.0% 100.0%
1kxgA00 2.60.120.40 Mainly Beta › Sandwich › Jelly Rolls › 0.59 47.0 5.11e-01 94.9% 100.0%
4zelB01 2.60.120.310 Mainly Beta › Sandwich › Jelly Rolls › Copper type II, ascorbate-dependent monooxygenase, N-terminal domain 0.58 44.0 4.82e-01 93.1% 97.2%
7jsdA01 2.60.120.620 Mainly Beta › Sandwich › Jelly Rolls › q2cbj1_9rhob like domain 0.57 41.0 3.65e-01 96.0% 51.2%
2c9aA01 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.56 48.0 4.95e-01 93.7% 97.5%
1lkfA00 2.70.240.10 Mainly Beta › Distorted Sandwich › Leukocidin-like › Leukocidin/porin MspA 0.56 47.0 4.04e-01 93.1% 74.7%
5lxvA01 2.60.40.680 Mainly Beta › Sandwich › Immunoglobulin-like › 0.55 46.0 4.76e-01 96.6% 92.9%
1oh4A00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.55 49.0 4.96e-01 95.4% 96.6%
3gf6A00 2.60.120.750 Mainly Beta › Sandwich › Jelly Rolls › Protein of unknown function DUF3845 0.55 51.0 4.70e-01 99.4% 89.0%
1dyoA00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.55 45.0 4.75e-01 94.9% 98.1%
4gwmA02 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.54 47.0 4.84e-01 92.6% 97.6%
2c4xA02 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.54 45.0 4.76e-01 93.7% 100.0%
2orzA02 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.54 44.0 4.58e-01 96.0% 95.0%
1m06G00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.53 47.0 4.64e-01 94.9% 93.0%
2bpa200 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.53 46.0 4.68e-01 95.4% 93.1%
2vmhA00 2.60.120.1060 Mainly Beta › Sandwich › Jelly Rolls › NPCBM/NEW2 domain 0.53 43.0 4.62e-01 94.3% 100.0%
5l73A00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.53 46.0 4.70e-01 96.0% 94.3%
2a6vB00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.52 46.0 4.28e-01 94.3% 99.5%
2q1fA01 2.60.120.430 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding lectin 0.52 43.0 4.47e-01 93.1% 91.6%
1o59A01 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.52 45.0 4.51e-01 96.6% 91.5%
3m1hD00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.51 46.0 4.64e-01 96.6% 100.0%
6r3mA01 2.60.120.430 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding lectin 0.51 45.0 4.66e-01 95.4% 99.4%
2jemA00 2.60.120.180 Mainly Beta › Sandwich › Jelly Rolls › Glycoside hydrolase family 11/12, catalytic domain 0.50 43.0 3.90e-01 90.9% 94.8%
4es8B01 2.60.120.1240 Mainly Beta › Sandwich › Jelly Rolls › 0.50 45.0 4.34e-01 96.6% 100.0%
4c47A01 2.60.40.1620 Mainly Beta › Sandwich › Immunoglobulin-like › Lipoprotein YajI-like 0.50 34.0 4.02e-01 92.6% 100.0%
1wmxA00 2.60.120.430 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding lectin 0.50 43.0 4.35e-01 91.4% 100.0%
ECOD (96)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
2044957 10.2.1.1 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.92 89.0 7.70e-01 100.0% 75.2%
4882965 10.2.1.1 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.92 68.0 7.41e-01 94.9% 89.1%
2389609 10.2.1.1 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.91 88.0 7.71e-01 100.0% 76.2%
2099173 10.2.1.1 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.90 87.0 7.35e-01 100.0% 82.1%
140027 10.2.1.1 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.89 84.0 7.26e-01 98.9% 68.8%
1841617 10.2.1.1 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.89 86.0 7.40e-01 100.0% 75.4%
1211 10.2.1.1 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.89 84.0 7.24e-01 98.9% 67.5%
2100469 10.2.1.1 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.89 86.0 7.35e-01 100.0% 77.0%
1949032 10.2.1.1 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.88 83.0 7.36e-01 98.9% 73.2%
1867996 10.2.1.1 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.88 85.0 7.18e-01 100.0% 77.2%
1400716 10.2.1.1 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.88 85.0 7.77e-01 100.0% 90.8%
4768609 10.2.1.1 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.87 85.0 7.10e-01 100.0% 80.4%
2099184 10.2.1.0 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) 0.87 83.0 6.70e-01 98.9% 72.7%
4888111 10.2.1.13 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Calici_coat 0.87 79.0 7.66e-01 100.0% 87.3%
3075118 10.2.1.1 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.87 84.0 7.12e-01 100.0% 80.2%
2726763 10.2.1.1 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.86 82.0 6.84e-01 99.4% 75.7%
2721878 10.2.1.1 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.86 82.0 7.12e-01 98.9% 76.0%
1949031 10.2.1.1 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.86 82.0 6.98e-01 98.9% 74.6%
1405130 10.2.1.1 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.86 81.0 7.11e-01 98.9% 76.0%
1264422 10.2.1.1 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.86 83.0 7.58e-01 100.0% 79.9%
140024 10.2.1.1 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.86 82.0 6.84e-01 99.4% 86.6%
4814721 10.2.1.13 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Calici_coat 0.86 78.0 7.35e-01 100.0% 81.7%
2505858 10.2.1.88 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv, Calici_coat 0.86 76.0 7.25e-01 98.3% 81.7%
2099164 10.2.1.1 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.85 82.0 6.76e-01 99.4% 69.5%
2440135 10.2.1.0 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) 0.85 81.0 7.24e-01 98.9% 81.2%
1696117 10.2.1.13 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Calici_coat 0.85 77.0 7.55e-01 100.0% 89.7%
4872939 10.2.1.13 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Calici_coat 0.85 79.0 7.41e-01 100.0% 81.8%
1693517 10.2.1.13 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Calici_coat 0.84 77.0 7.27e-01 98.9% 82.5%
2982737 10.2.1.0 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) 0.84 80.0 6.67e-01 98.9% 74.1%
2793614 10.2.1.13 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Calici_coat 0.84 78.0 7.23e-01 100.0% 79.0%
2044958 10.2.1.1 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.84 80.0 6.90e-01 99.4% 86.2%
2982483 10.2.1.1 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.84 79.0 7.03e-01 98.9% 77.6%
2439648 10.2.1.1 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.84 79.0 6.66e-01 98.9% 72.2%
4900996 10.2.1.88 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv, Calici_coat 0.83 64.0 6.29e-01 84.0% 74.5%
2982736 10.2.1.1 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.83 79.0 6.99e-01 98.9% 73.0%
2579094 10.2.1.0 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) 0.83 79.0 6.74e-01 99.4% 74.7%
2579093 10.2.1.0 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) 0.83 78.0 6.99e-01 98.3% 74.5%
1945727 10.2.1.1 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.83 77.0 6.71e-01 98.9% 73.3%
1933849 10.2.1.1 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.82 78.0 7.07e-01 98.9% 77.6%
1697855 10.2.1.1 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.82 77.0 6.80e-01 98.9% 71.4%
2983138 10.2.1.88 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv, Calici_coat 0.82 77.0 6.84e-01 98.9% 77.3%
2414126 10.2.1.0 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) 0.82 77.0 6.81e-01 98.9% 72.6%
1489398 10.2.1.1 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.81 76.0 6.69e-01 98.9% 75.3%
1693522 10.2.1.49 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Capsid-VNN 0.81 74.0 7.24e-01 100.0% 89.2%
1877512 10.2.1.32 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Astro_capsid_N 0.80 76.0 7.51e-01 100.0% 97.8%
139106 10.2.1.1 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.80 75.0 6.84e-01 98.9% 78.8%
169772 10.2.1.1 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.80 75.0 6.65e-01 98.9% 79.0%
1724852 10.2.1.7 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Viral_coat 0.80 71.0 7.27e-01 100.0% 97.6%
143448 10.2.1.38 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nepo_coat_N 0.79 69.0 7.16e-01 94.3% 97.0%
31099 10.2.1.1 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.79 74.0 6.69e-01 98.9% 78.3%
2330242 10.2.1.24 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Como_LCP 0.79 71.0 7.00e-01 97.7% 90.2%
2441244 10.2.1.7 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Viral_coat 0.78 74.0 6.79e-01 100.0% 81.4%
4172901 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.78 51.0 6.19e-01 97.1% 100.0%
1214 10.2.1.38 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nepo_coat_N 0.78 70.0 7.03e-01 96.0% 94.3%
4103741 10.32.1.19 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › PPC 0.78 47.0 5.98e-01 92.0% 100.0%
1687952 10.2.1.1 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.77 72.0 6.59e-01 98.9% 78.4%
1405131 10.2.1.51 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › HAV_VP 0.77 73.0 6.24e-01 100.0% 88.2%
3609787 10.32.1.4 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › EMP24_GP25L 0.77 47.0 5.30e-01 88.6% 78.5%
2542980 10.2.1.7 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Viral_coat 0.76 67.0 6.55e-01 97.1% 85.3%
1758310 10.2.1.7 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Viral_coat 0.76 69.0 6.50e-01 100.0% 81.9%
2389608 10.2.1.44 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › CRPV_capsid 0.75 70.0 6.23e-01 100.0% 92.2%
1215 10.2.1.34 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nepo_coat 0.74 66.0 6.73e-01 100.0% 96.5%
2440134 10.2.1.44 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › CRPV_capsid 0.74 62.0 6.07e-01 98.9% 81.4%
1886797 10.2.1.69 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv_5 0.74 69.0 6.04e-01 99.4% 74.3%
2526957 10.2.1.1 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.74 69.0 5.76e-01 98.9% 66.0%
1219 10.2.1.24 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Como_LCP 0.74 69.0 6.77e-01 100.0% 93.6%
1713715 10.2.1.69 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv_5 0.74 69.0 5.76e-01 98.9% 64.6%
289259 10.2.1.7 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Viral_coat 0.74 70.0 6.36e-01 100.0% 84.0%
1232 10.2.1.7 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Viral_coat 0.73 69.0 6.66e-01 100.0% 96.4%
152483 10.2.1.1 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.73 68.0 5.75e-01 99.4% 65.4%
31171 10.2.1.15 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Tymo_coat 0.73 61.0 6.02e-01 100.0% 82.9%
143449 10.2.1.34 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nepo_coat 0.73 66.0 6.65e-01 100.0% 96.6%
3676965 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.72 49.0 5.39e-01 95.4% 85.7%
3272798 10.32.1.3 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Calpain_III 0.70 52.0 5.90e-01 94.9% 99.3%
2006903 10.2.1.44 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › CRPV_capsid 0.68 63.0 5.34e-01 98.9% 65.4%
140026 10.2.1.44 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › CRPV_capsid 0.68 63.0 5.40e-01 98.9% 68.9%
3271025 10.32.1.3 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Calpain_III 0.67 50.0 5.46e-01 94.9% 92.4%
4019681 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.66 45.0 5.00e-01 95.4% 85.7%
5046043 10.1.2.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.63 46.0 5.24e-01 89.1% 97.0%
4944599 10.1.2.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.63 45.0 5.03e-01 96.0% 94.8%
3500041 10.4.1.1 ↗ beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain › CUB 0.61 41.0 4.76e-01 93.7% 98.3%
3745246 10.3.1.2 ↗ beta sandwiches › jelly-roll › TNF-like › TNF-like › C1q 0.60 46.0 5.07e-01 97.7% 99.3%
3888045 10.2.1.5 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › TGFb_propeptide 0.58 47.0 4.70e-01 97.1% 82.7%
2443964 10.32.1.23 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Bac_rhamnosid 0.58 39.0 4.57e-01 96.0% 99.2%
3932049 10.2.1.0 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) 0.57 43.0 4.37e-01 97.1% 80.0%
4515092 11.1.1.2 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 0.54 30.0 3.67e-01 96.0% 85.5%
3278369 10.32.1.31 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › PepX_C 0.53 48.0 4.31e-01 96.6% 99.1%
3999276 10.1.1.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.53 47.0 4.64e-01 96.6% 91.4%
3269628 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.52 47.0 4.77e-01 97.1% 100.0%
4937335 10.1.2.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.52 44.0 4.52e-01 94.3% 93.5%
4491474 10.32.1.31 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › PepX_C 0.52 46.0 4.57e-01 94.9% 98.3%
3293824 10.12.1.3 ↗ beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_1 0.52 34.0 3.17e-01 99.4% 53.0%
3239398 10.1.1.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.52 46.0 4.57e-01 97.1% 96.8%
3626905 10.1.1.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.51 45.0 4.52e-01 96.0% 93.1%
5083402 10.1.2.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.50 46.0 4.55e-01 99.4% 99.5%
3620780 10.1.1.10 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › MAM 0.50 45.0 4.45e-01 98.3% 100.0%
D2 medium residues 390-458
PDB