VP1054

Euk-Vir

Mocis_latipes_granulovirus

VP1054__YP_009249975__Mocis_latipes_granulovirus__2072024

Identity

74.1 mean pLDDT

Naldaviricetes› Lefavirales› Baculoviridae› Betabaculovirus› Mocis_latipes_granulovirus

TaxID: 2072024

View cluster (46 members)

Download PDB Download Scores JSON

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 164-319

PDB

Domain cluster: representative

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF05789.17 best	Baculo_VP1054	215.2	2.50e-63	100.0%	50.0%

CATH (3)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
2hujA00	1.20.120.440	Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › YppE-like	0.60	33.0	3.62e-01	87.8%	64.8%
2ot4A03	1.20.140.10	Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3	0.55	32.0	3.69e-01	85.3%	79.4%
1wkbA03	1.10.730.10	Mainly Alpha › Orthogonal Bundle › Isoleucyl-tRNA Synthetase; Domain 1 › Isoleucyl-tRNA Synthetase; Domain 1	0.53	29.0	3.32e-01	84.6%	69.4%

ECOD (2)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3953156	601.3.1.5 ↗	alpha bundles › Four-helical up-and-down bundle › Histidine-containing phosphotransfer domain, HPT domain › Histidine-containing phosphotransfer domain, HPT domain › Alpha-E	0.59	39.0	3.82e-01	100.0%	61.2%
4647466	601.23.1.4 ↗	alpha bundles › Four-helical up-and-down bundle › DNA repair protein MutS, domain III › DNA repair protein MutS, domain III › MutS_IV, MutS_III	0.53	43.0	3.36e-01	85.3%	68.3%

D2 medium residues 30-112

PDB

Domain cluster: rep: vp1054__YP_009112672__Agrotis_segetum_nucleopolyhedrovirus_B__1580580__D40-103

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF05789.17 best	Baculo_VP1054	66.4	4.70e-18	100.0%	27.8%