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VP1
Euk-VirGoose_parvovirus
VP1__NP_043515__Goose_parvovirus__38251
Identity
- Accession:
- NP_043515 ↗
- Protein ID:
- VP1
- Kingdom:
- euk
Quality
71.3
mean pLDDT
Taxonomy
Shotokuvirae›
Cossaviricota›
Quintoviricetes›
Piccovirales›
Parvoviridae›
Dependoparvovirus›
Goose_parvovirus
TaxID: 38251
Cluster
View cluster (92 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 227-422_609-685
Domain cluster:
rep: VP2__YP_009508801__Miniopterus_schreibersii_bat_bocavirus__1911554__D51-253_470-529
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00740.24 best | VP1_2 | 246.5 | 7.10e-73 | 72.5% | 41.3% |
| PF00740.24 | VP1_2 | 66.7 | 2.10e-18 | 29.3% | 13.0% |
D2
medium
residues 1-11_49-143
Domain cluster:
rep: capsid_protein_VP1__YP_009508795__Bat_bocavirus_XM30__2259811__D8-95
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF08398.16 best | Phospholip_A2_4 | 111.3 | 3.10e-32 | 75.5% | 100.0% |
D3
medium
residues 423-485
Domain cluster:
rep: capsid_protein__YP_077178__Adeno-associated_virus_-_7__202812__D428-485
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00740.24 best | VP1_2 | 31.6 | 9.40e-08 | 100.0% | 12.0% |