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VP1

Euk-Vir

Human_bocavirus_2c_PK

VP1__YP_002586775__Human_bocavirus_2c_PK__1511882

Identity

Accession:
YP_002586775 ↗
Protein ID:
VP1
Kingdom:
euk

Quality

71.1 mean pLDDT

Taxonomy

Shotokuvirae› Cossaviricota› Quintoviricetes› Piccovirales› Parvoviridae› Bocaparvovirus› Human_bocavirus_2c_PK

TaxID: 1511882

Cluster

View cluster (92 members)

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 3-94
PDB
Domain cluster: rep: capsid_protein_VP1__YP_009508795__Bat_bocavirus_XM30__2259811__D8-95
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF08398.16 best Phospholip_A2_4 105.1 2.60e-30 87.0% 98.8%
D2 medium residues 172-190_228-306_358-396_485-508_535-605
PDB
Domain cluster: rep: VP2__YP_009508801__Miniopterus_schreibersii_bat_bocavirus__1911554__D51-253_470-529
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF00740.24 best VP1_2 53.5 2.30e-14 35.8% 13.3%
D3 medium residues 191-227_307-357
PDB
Domain cluster: rep: VP2__YP_010087790__Primate_bocaparvovirus_3__2654204__D72-103_156-226
D4 medium residues 397-484_509-534
PDB
D5 medium residues 606-667
PDB
Domain cluster: rep: VP2__YP_002808457__Human_bocavirus_3__638313__D489-539