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VP1

Euk-Vir

Pigeon_picornavirus_B

VP1__YP_004564612__Pigeon_picornavirus_B__928289

Identity

Accession:
YP_004564612 ↗
Protein ID:
VP1
Kingdom:
euk

Quality

67.5 mean pLDDT

Taxonomy

Orthornavirae› Pisuviricota› Pisoniviricetes› Picornavirales› Picornaviridae› Pigeon_picornavirus_B

TaxID: 928289

Cluster

View cluster (38 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 89-268
PDB
Domain cluster: rep: structural_polyprotein__YP_009333175__Bastrovirus-like_virus_VietNam_Bat_17819_21__1906170__D141-305
Pfam (2)
AccessionNameScoreE-valueQ covHMM cov
PF22663.3 best Rhv_5 126.0 2.80e-36 100.0% 82.4%
PF00073.27 Rhv 36.2 7.00e-09 77.8% 59.1%
CATH (91)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
5jzgA00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.86 74.0 6.76e-01 100.0% 70.4%
1bev100 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.86 80.0 6.78e-01 100.0% 64.2%
4rs5A00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.85 79.0 7.27e-01 100.0% 78.7%
6jhsA00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.84 76.0 6.57e-01 100.0% 65.4%
6sk6A00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.83 80.0 6.74e-01 100.0% 67.0%
1cov100 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.82 78.0 6.64e-01 100.0% 66.2%
3cjiA00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.80 77.0 6.65e-01 100.0% 81.8%
1mec100 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.80 76.0 6.49e-01 100.0% 77.4%
2ws9100 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.80 76.0 6.73e-01 100.0% 75.6%
3napB00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.79 69.0 6.11e-01 100.0% 66.0%
4qpiB00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.79 67.0 6.22e-01 100.0% 72.8%
5mqcB00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.79 68.0 6.21e-01 100.0% 70.6%
4rft000 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.78 63.0 6.65e-01 100.0% 93.3%
7chkB01 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.78 56.0 6.49e-01 97.2% 100.0%
4nwvA01 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.78 66.0 6.57e-01 100.0% 86.4%
1b35B00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.78 68.0 6.01e-01 100.0% 65.1%
7dodB01 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.78 65.0 6.36e-01 100.0% 81.3%
2gh8A01 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.78 65.0 6.28e-01 100.0% 78.2%
5aca300 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.77 68.0 6.26e-01 100.0% 74.8%
1opoC01 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.77 64.0 6.67e-01 100.0% 95.8%
1pm4A00 2.60.120.510 Mainly Beta › Sandwich › Jelly Rolls › Mitogen Ypm 0.76 44.0 5.41e-01 95.0% 88.0%
2ws9300 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.75 67.0 6.19e-01 100.0% 75.2%
2y26A01 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.75 64.0 5.07e-01 98.3% 46.8%
1ihmB01 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.75 64.0 5.97e-01 100.0% 73.6%
2ws9201 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.75 65.0 6.38e-01 100.0% 85.1%
4llfD01 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.74 63.0 6.40e-01 100.0% 90.4%
3napC00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.74 70.0 5.97e-01 100.0% 72.8%
3jb4C00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.74 65.0 5.85e-01 100.0% 68.9%
2izwC00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.74 63.0 6.03e-01 100.0% 78.4%
5yl1A01 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.74 68.0 6.84e-01 100.0% 97.2%
2tbvA00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.74 62.0 5.26e-01 100.0% 55.9%
1a6cA01 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.73 64.0 5.04e-01 98.9% 47.1%
5j98B00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.73 69.0 6.03e-01 100.0% 73.1%
4qpiC00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.73 69.0 6.16e-01 100.0% 73.2%
3vbhC00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.73 69.0 6.20e-01 100.0% 74.8%
6mrmC01 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.73 62.0 6.37e-01 100.0% 94.7%
5k0uB00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.73 66.0 6.03e-01 100.0% 74.0%
1b35C00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.72 68.0 5.76e-01 100.0% 66.7%
1tme300 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.72 65.0 5.97e-01 100.0% 75.2%
3jb8A00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.72 64.0 6.37e-01 100.0% 92.4%
1b35A00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.71 67.0 5.83e-01 100.0% 76.2%
4oq8A00 2.60.120.220 Mainly Beta › Sandwich › Jelly Rolls › Satellite virus coat domain 0.71 47.0 5.24e-01 98.9% 83.3%
6eiwA01 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.71 67.0 6.54e-01 100.0% 96.9%
2y26A02 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.71 57.0 6.04e-01 100.0% 94.4%
1e57B00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.71 56.0 5.61e-01 100.0% 81.4%
1stmA00 2.60.120.220 Mainly Beta › Sandwich › Jelly Rolls › Satellite virus coat domain 0.70 51.0 5.63e-01 100.0% 93.6%
3cjiB00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.70 66.0 5.95e-01 100.0% 75.6%
2ztnA01 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.70 64.0 6.35e-01 100.0% 93.2%
5mqcC00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.70 66.0 5.76e-01 100.0% 71.9%
1cwpA00 2.60.120.220 Mainly Beta › Sandwich › Jelly Rolls › Satellite virus coat domain 0.70 50.0 5.45e-01 100.0% 87.9%
1smvC00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.69 65.0 6.03e-01 100.0% 82.4%
5ewnA01 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.69 63.0 6.29e-01 100.0% 95.7%
4indA03 2.60.120.1330 Mainly Beta › Sandwich › Jelly Rolls › 0.69 42.0 5.08e-01 96.1% 90.8%
1f15B00 2.60.120.530 Mainly Beta › Sandwich › Jelly Rolls › Cucumovirus coat protein, subunit A 0.68 53.0 5.23e-01 100.0% 75.8%
1tme200 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.68 64.0 5.64e-01 100.0% 78.0%
3napA00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.68 62.0 5.42e-01 100.0% 66.3%
3jciA00 2.60.120.950 Mainly Beta › Sandwich › Jelly Rolls › Circovirus capsid protein 0.68 63.0 6.20e-01 100.0% 93.2%
1ng0C00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.67 62.0 5.79e-01 100.0% 81.7%
5c8cB00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.67 63.0 5.30e-01 100.0% 65.4%
1lr5B00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.67 34.0 3.66e-01 95.6% 54.7%
2vm9A02 2.60.40.2080 Mainly Beta › Sandwich › Immunoglobulin-like › 0.66 36.0 4.77e-01 97.2% 98.0%
1pgsA01 2.60.120.230 Mainly Beta › Sandwich › Jelly Rolls › 0.64 47.0 5.29e-01 97.8% 99.3%
3ibmB00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.64 31.0 3.45e-01 97.2% 54.8%
1f8vC00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.64 59.0 4.92e-01 100.0% 80.7%
1hx6A02 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.64 44.0 4.95e-01 100.0% 89.4%
4indA02 2.60.120.1310 Mainly Beta › Sandwich › Jelly Rolls › 0.64 40.0 5.00e-01 95.0% 100.0%
6cl5A01 2.60.40.3940 Mainly Beta › Sandwich › Immunoglobulin-like › 0.63 34.0 4.39e-01 97.2% 91.2%
1novA00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.63 58.0 4.84e-01 100.0% 79.6%
2waaA01 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.63 40.0 4.73e-01 96.1% 92.7%
4h3wA02 2.60.120.1260 Mainly Beta › Sandwich › Jelly Rolls › 0.62 47.0 5.12e-01 97.8% 93.4%
2wq4A01 2.60.120.760 Mainly Beta › Sandwich › Jelly Rolls › 0.61 43.0 4.97e-01 96.7% 100.0%
2y7lA02 2.60.40.2430 Mainly Beta › Sandwich › Immunoglobulin-like › Agglutinin-like protein, N-terminal domain, N2 subdomain 0.59 39.0 4.24e-01 96.1% 78.8%
2f68X02 2.60.40.740 Mainly Beta › Sandwich › Immunoglobulin-like › 0.59 43.0 4.49e-01 98.3% 82.1%
2x12A01 2.60.40.2010 Mainly Beta › Sandwich › Immunoglobulin-like › 0.57 42.0 4.15e-01 96.7% 71.1%
6a48A01 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.57 45.0 4.93e-01 95.0% 100.0%
6a48A02 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.57 43.0 4.85e-01 93.3% 100.0%
4msvA01 2.60.120.40 Mainly Beta › Sandwich › Jelly Rolls › 0.56 41.0 4.59e-01 97.2% 98.5%
3kmhA00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.56 34.0 3.18e-01 95.0% 48.6%
2c9aA01 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.55 46.0 4.89e-01 95.6% 97.5%
2w1sA00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.55 41.0 4.60e-01 93.9% 99.3%
2zewB00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.55 43.0 4.72e-01 95.0% 98.6%
2bpa200 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.53 45.0 4.57e-01 96.1% 92.0%
3emrA00 2.60.120.620 Mainly Beta › Sandwich › Jelly Rolls › q2cbj1_9rhob like domain 0.53 39.0 3.36e-01 100.0% 47.8%
5y4mA00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.53 42.0 4.55e-01 97.2% 100.0%
6r3mA01 2.60.120.430 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding lectin 0.52 45.0 4.70e-01 96.7% 97.6%
2opwA00 2.60.120.620 Mainly Beta › Sandwich › Jelly Rolls › q2cbj1_9rhob like domain 0.52 38.0 3.28e-01 98.9% 47.6%
4xabA00 2.60.120.620 Mainly Beta › Sandwich › Jelly Rolls › q2cbj1_9rhob like domain 0.52 39.0 3.51e-01 98.9% 56.3%
1jv2A04 2.60.40.1530 Mainly Beta › Sandwich › Immunoglobulin-like › ntegrin, alpha v. Chain A, domain 4 0.52 45.0 4.46e-01 98.9% 88.8%
2a6vB00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.51 46.0 4.34e-01 96.7% 99.5%
1m06G00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.51 45.0 4.49e-01 97.2% 92.5%
3vgiA00 2.60.120.180 Mainly Beta › Sandwich › Jelly Rolls › Glycoside hydrolase family 11/12, catalytic domain 0.50 45.0 3.92e-01 96.1% 89.6%
ECOD (91)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
152483 10.2.1.1 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.87 81.0 6.81e-01 100.0% 62.5%
1866791 10.2.1.69 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv_5 0.86 74.0 6.34e-01 100.0% 60.5%
1713715 10.2.1.69 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv_5 0.85 81.0 6.73e-01 100.0% 62.1%
1204 10.2.1.69 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv_5 0.85 80.0 6.68e-01 100.0% 61.8%
2526957 10.2.1.1 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.85 82.0 6.82e-01 100.0% 63.5%
2880697 10.2.1.69 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv_5 0.85 82.0 6.69e-01 100.0% 63.6%
2884840 10.2.1.50 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) 0.84 79.0 6.54e-01 100.0% 60.4%
1405131 10.2.1.51 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › HAV_VP 0.83 75.0 6.50e-01 100.0% 64.6%
148379 10.2.1.69 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv_5 0.83 79.0 6.49e-01 100.0% 59.9%
1043486 10.2.1.1 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.83 79.0 6.59e-01 100.0% 65.6%
2632608 10.2.1.1 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.81 58.0 6.50e-01 74.4% 90.3%
4814721 10.2.1.13 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Calici_coat 0.81 67.0 6.45e-01 100.0% 76.7%
4882276 10.2.1.1 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.81 72.0 7.13e-01 93.3% 90.0%
1886797 10.2.1.69 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv_5 0.80 76.0 6.70e-01 100.0% 71.1%
169770 10.2.1.69 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv_5 0.80 77.0 6.65e-01 100.0% 81.8%
None — 0.80 76.0 7.07e-01 100.0% 93.6%
140694 10.2.1.69 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv_5 0.79 76.0 6.71e-01 100.0% 75.6%
1106655 10.2.1.69 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv_5 0.79 74.0 7.09e-01 100.0% 87.3%
1264372 10.2.1.69 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv_5 0.79 76.0 6.40e-01 100.0% 76.1%
1949032 10.2.1.1 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.79 68.0 6.21e-01 100.0% 70.6%
4900996 10.2.1.88 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv, Calici_coat 0.79 58.0 5.84e-01 88.3% 74.5%
1693522 10.2.1.49 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Capsid-VNN 0.78 66.0 6.55e-01 100.0% 85.9%
1687952 10.2.1.1 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.77 68.0 6.26e-01 100.0% 74.8%
4888111 10.2.1.13 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Calici_coat 0.77 64.0 6.33e-01 100.0% 83.1%
1724852 10.2.1.7 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Viral_coat 0.77 64.0 6.66e-01 100.0% 95.2%
1867996 10.2.1.1 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.76 65.0 5.67e-01 100.0% 61.2%
2389609 10.2.1.1 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.75 68.0 6.15e-01 100.0% 72.4%
140024 10.2.1.1 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.74 70.0 5.97e-01 100.0% 72.8%
5013259 10.1.2.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.74 44.0 5.25e-01 96.7% 84.8%
1697855 10.2.1.1 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.74 65.0 5.85e-01 100.0% 68.9%
1841618 10.2.1.44 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › CRPV_capsid 0.74 70.0 6.18e-01 100.0% 77.0%
328688 10.2.1.7 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Viral_coat 0.74 63.0 6.03e-01 100.0% 78.4%
1758310 10.2.1.7 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Viral_coat 0.74 62.0 5.95e-01 100.0% 78.4%
1405130 10.2.1.1 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.73 69.0 6.16e-01 100.0% 73.2%
5040234 10.1.2.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.73 46.0 5.57e-01 97.2% 96.5%
2542980 10.2.1.7 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Viral_coat 0.73 62.0 6.08e-01 100.0% 83.8%
5039010 10.1.2.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.73 45.0 5.20e-01 98.9% 83.8%
2439648 10.2.1.1 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.73 69.0 5.89e-01 100.0% 69.6%
2099164 10.2.1.1 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.72 68.0 5.76e-01 100.0% 66.7%
3699095 10.2.1.55 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › NPL 0.72 39.0 5.17e-01 98.3% 98.9%
1219 10.2.1.24 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Como_LCP 0.72 63.0 6.27e-01 100.0% 89.4%
1866058 10.2.1.7 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Viral_coat 0.72 64.0 6.37e-01 100.0% 92.4%
2579092 10.2.1.44 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › CRPV_capsid 0.72 67.0 5.81e-01 100.0% 77.5%
1945727 10.2.1.1 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.71 67.0 5.89e-01 100.0% 70.6%
1213 10.2.1.44 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › CRPV_capsid 0.71 67.0 5.83e-01 100.0% 76.2%
5020586 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.71 44.0 4.65e-01 100.0% 68.8%
146646 10.2.1.30 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › SP2 0.70 64.0 6.27e-01 100.0% 90.7%
2982737 10.2.1.0 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) 0.70 66.0 5.64e-01 100.0% 71.9%
4306604 10.4.1.0 ↗ beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain 0.70 42.0 5.31e-01 95.0% 100.0%
143449 10.2.1.34 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nepo_coat 0.70 60.0 6.08e-01 100.0% 92.7%
2099173 10.2.1.1 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.70 65.0 5.64e-01 100.0% 78.7%
289259 10.2.1.7 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Viral_coat 0.69 65.0 5.98e-01 100.0% 81.3%
5003083 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.69 43.0 4.46e-01 100.0% 66.7%
1232 10.2.1.7 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Viral_coat 0.69 65.0 6.32e-01 100.0% 93.4%
5058689 10.1.2.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.69 39.0 5.08e-01 92.2% 99.0%
1877512 10.2.1.32 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Astro_capsid_N 0.69 62.0 6.22e-01 100.0% 95.7%
3213513 10.32.1.218 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › DUF7154 0.68 43.0 5.32e-01 97.2% 99.1%
140026 10.2.1.44 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › CRPV_capsid 0.68 62.0 5.42e-01 100.0% 66.3%
3875909 10.32.1.3 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Calpain_III 0.67 50.0 5.20e-01 98.9% 82.4%
2117349 10.2.1.10 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Cucumo_coat 0.67 52.0 5.11e-01 100.0% 75.9%
3565621 10.32.1.234 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › PGAP1_3rd 0.65 44.0 4.64e-01 100.0% 75.8%
3314257 10.32.1.193 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › MP 0.64 53.0 5.41e-01 99.4% 89.7%
3214908 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.63 40.0 4.65e-01 95.0% 88.5%
1156538 10.32.1.56 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › CE2_N 0.63 40.0 4.73e-01 96.1% 92.7%
3884618 10.32.1.225 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › PF31127 0.63 50.0 5.08e-01 100.0% 83.9%
3233837 10.4.1.0 ↗ beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain 0.62 41.0 4.70e-01 96.1% 90.8%
3400203 10.4.1.0 ↗ beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain 0.62 40.0 4.61e-01 95.6% 91.2%
362706 10.32.1.2 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › F5_F8_type_C 0.62 42.0 4.57e-01 97.2% 83.6%
3344591 10.2.1.81 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › MP 0.62 52.0 4.99e-01 99.4% 78.0%
3399280 10.4.1.1 ↗ beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain › CUB 0.61 40.0 4.59e-01 97.2% 90.8%
5009585 10.1.2.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.61 47.0 4.90e-01 97.2% 87.2%
3805836 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.59 39.0 4.48e-01 96.7% 90.4%
1548159 10.32.1.67 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Glyco_hydro_78_N 0.58 47.0 4.85e-01 98.3% 87.9%
3896769 10.2.1.0 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) 0.58 48.0 4.81e-01 100.0% 85.4%
3901411 11.1.1.2 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 0.58 35.0 4.37e-01 96.7% 98.2%
5056812 10.1.2.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.57 45.0 4.91e-01 90.0% 99.3%
5009882 10.1.2.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.57 44.0 4.88e-01 95.0% 100.0%
3719077 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.56 51.0 4.82e-01 96.1% 84.7%
3293824 10.12.1.3 ↗ beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_1 0.56 33.0 3.11e-01 98.3% 47.0%
3908007 10.3.1.1 ↗ beta sandwiches › jelly-roll › TNF-like › TNF-like › TNF 0.56 43.0 4.70e-01 97.8% 97.3%
4189104 11.1.1.2 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 0.55 36.0 4.26e-01 89.4% 100.0%
4293266 10.2.1.97 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › TGF_beta 0.55 43.0 3.53e-01 96.1% 46.2%
3593524 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.55 49.0 4.75e-01 97.8% 98.5%
3168473 10.32.1.306 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › PF30096 0.54 49.0 4.81e-01 97.2% 97.4%
3860557 385.1.1.0 ↗ few secondary structure elements › Cystine-knot cytokines › Cystine-knot cytokines › Cystine-knot cytokines 0.54 44.0 3.51e-01 100.0% 43.5%
3474757 10.32.1.188 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › TMEM181_GOLD 0.54 45.0 4.79e-01 94.4% 100.0%
4615128 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.53 42.0 4.52e-01 97.2% 98.0%
1674132 10.12.1.25 ↗ beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › PhyH 0.52 39.0 3.51e-01 98.9% 56.3%
3558842 10.2.1.5 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › TGFb_propeptide 0.52 45.0 4.07e-01 100.0% 69.9%
3937325 10.10.1.0 ↗ beta sandwiches › jelly-roll › Lipase/lipooxygenase domain (PLAT/LH2 domain) › Lipase/lipooxygenase domain (PLAT/LH2 domain) 0.51 36.0 3.72e-01 95.6% 76.2%
3391776 10.32.1.69 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › LAMININ_IV_B 0.51 47.0 4.47e-01 100.0% 100.0%