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VP1
Euk-VirPorcine_bocavirus_3
VP1__YP_004869643__Porcine_bocavirus_3__1084715
Identity
- Accession:
- YP_004869643 ↗
- Protein ID:
- VP1
- Kingdom:
- euk
Quality
68.2
mean pLDDT
Taxonomy
Shotokuvirae›
Cossaviricota›
Quintoviricetes›
Piccovirales›
Parvoviridae›
Bocaparvovirus›
Porcine_bocavirus_3
TaxID: 1084715
Cluster
View cluster (92 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 8-95
D2
medium
residues 189-204_238-286_376-388_560-657
Domain cluster:
rep: VP2__YP_009508801__Miniopterus_schreibersii_bat_bocavirus__1911554__D51-253_470-529
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00740.24 best | VP1_2 | 37.0 | 2.20e-09 | 61.4% | 15.2% |
| PF00740.24 | VP1_2 | 33.3 | 3.00e-08 | 40.3% | 9.5% |
D3
medium
residues 205-237_287-375
Domain cluster:
rep: VP2__YP_010087790__Primate_bocaparvovirus_3__2654204__D72-103_156-226
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00740.24 best | VP1_2 | 42.8 | 3.90e-11 | 79.5% | 17.1% |
D4
medium
residues 389-476_526-559