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VP1
Euk-VirPorcine_bocavirus_4-1
VP1__YP_004869647__Porcine_bocavirus_4-1__1084717
Identity
- Accession:
- YP_004869647 ↗
- Protein ID:
- VP1
- Kingdom:
- euk
Quality
67.2
mean pLDDT
Taxonomy
Shotokuvirae›
Cossaviricota›
Quintoviricetes›
Piccovirales›
Parvoviridae›
Bocaparvovirus›
Porcine_bocavirus_4-1
TaxID: 1084717
Cluster
View cluster (92 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 8-94
Domain cluster:
rep: capsid_protein_VP1__YP_009508795__Bat_bocavirus_XM30__2259811__D8-95
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF08398.16 best | Phospholip_A2_4 | 96.7 | 1.10e-27 | 92.0% | 100.0% |
D2
medium
residues 186-204_246-265_561-684
Domain cluster:
rep: VP2__YP_009508801__Miniopterus_schreibersii_bat_bocavirus__1911554__D51-253_470-529
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00740.24 best | VP1_2 | 33.2 | 3.10e-08 | 57.1% | 15.0% |
D3
medium
residues 205-245_266-389
Domain cluster:
rep: VP2__YP_009508801__Miniopterus_schreibersii_bat_bocavirus__1911554__D51-253_470-529
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00740.24 best | VP1_2 | 68.9 | 4.80e-19 | 75.1% | 22.9% |
D4
medium
residues 390-440_497-526
D5
medium
residues 462-496_527-560