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VP1

Euk-Vir

Sea_otter_parvovirus_1

VP1__YP_009272691__Sea_otter_parvovirus_1__1882382

Identity

Accession:
YP_009272691 ↗
Protein ID:
VP1
Kingdom:
euk

Quality

56.2 mean pLDDT

Taxonomy

Shotokuvirae› Cossaviricota› Quintoviricetes› Piccovirales› Parvoviridae› Sea_otter_parvovirus_1

TaxID: 1882382

Cluster

View cluster (20 members)

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 187-357_392-420_422-427_601-676
PDB
Domain cluster: rep: VP2__YP_009508801__Miniopterus_schreibersii_bat_bocavirus__1911554__D51-253_470-529
Pfam (2)
AccessionNameScoreE-valueQ covHMM cov
PF00740.24 best VP1_2 151.3 5.10e-44 72.7% 39.1%
PF00740.24 VP1_2 37.7 1.40e-09 28.4% 10.1%
D2 medium residues 6-97
PDB
Domain cluster: rep: capsid_protein_VP1__YP_009508795__Bat_bocavirus_XM30__2259811__D8-95
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF08398.16 best Phospholip_A2_4 96.1 1.70e-27 87.0% 98.8%