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VP1
Euk-VirRhinolophus_sinicus_bocaparvovirus
VP1__YP_009315893__Rhinolophus_sinicus_bocaparvovirus__1911555
Identity
- Accession:
- YP_009315893 ↗
- Protein ID:
- VP1
- Kingdom:
- euk
Quality
67.6
mean pLDDT
Taxonomy
Shotokuvirae›
Cossaviricota›
Quintoviricetes›
Piccovirales›
Parvoviridae›
Bocaparvovirus›
Rhinolophus_sinicus_bocaparvovirus
TaxID: 1911555
Cluster
View cluster (92 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 175-380_569-670
Domain cluster:
rep: VP2__YP_009508801__Miniopterus_schreibersii_bat_bocavirus__1911554__D51-253_470-529
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00740.24 best | VP1_2 | 133.9 | 9.20e-39 | 66.9% | 39.4% |
D2
medium
residues 15-95
Domain cluster:
rep: capsid_protein_VP1__YP_009508795__Bat_bocavirus_XM30__2259811__D8-95
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF08398.16 best | Phospholip_A2_4 | 92.7 | 1.90e-26 | 90.1% | 91.2% |
D3
medium
residues 386-448_553-568
D4
medium
residues 449-461_477-504_521-552