VP1

Euk-Vir

Betapolyomavirus_lepweddellii

VP1__YP_009329838__Betapolyomavirus_lepweddellii__1925019

Identity

71.9 mean pLDDT

Shotokuvirae› Cossaviricota› Papovaviricetes› Sepolyvirales› Polyomaviridae› Betapolyomavirus› Betapolyomavirus_lepweddellii

TaxID: 1925019

View cluster (117 members)

Download PDB Download Scores JSON

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 18-80

PDB

Domain cluster: representative

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF00718.29 best	Polyoma_coat	64.4	1.30e-17	96.8%	21.3%

D2 medium residues 81-110_234-255_293-326

PDB

Domain cluster: representative

Pfam (2)

Accession	Name	Score	E-value	Q cov	HMM cov
PF00718.29 best	Polyoma_coat	44.1	2.00e-11	37.2%	10.1%
PF00718.29	Polyoma_coat	34.2	2.00e-08	27.9%	7.4%

ECOD (1)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
2666438	10.2.1.6 ↗	beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Polyoma_coat	0.83	64.0	4.14e-01	80.2%	69.4%