←Back to structures
VP1
Euk-VirSimian_parvovirus
VP1__YP_009507369__Simian_parvovirus__31598
Identity
- Accession:
- YP_009507369 ↗
- Protein ID:
- VP1
- Kingdom:
- euk
Quality
60.3
mean pLDDT
Taxonomy
Shotokuvirae›
Cossaviricota›
Quintoviricetes›
Piccovirales›
Parvoviridae›
Erythroparvovirus›
Simian_parvovirus
TaxID: 31598
Cluster
View cluster (6 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 147-250
D2
medium
residues 287-303_342-383_442-467_490-504_751-763
Domain cluster:
rep: capsid_protein_2__YP_004928148__Human_parvovirus_B19__10798__D22-40_52-122_172-219
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00740.24 best | VP1_2 | 40.9 | 1.50e-10 | 53.1% | 8.0% |
D3
medium
residues 304-323_384-441_468-489_717-750
Domain cluster:
rep: VP1_VP2__YP_009553052__Rousettus_leschenaultii_bocaparvovirus_1__2053082__D261-317_596-621
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00740.24 best | VP1_2 | 64.0 | 1.40e-17 | 52.2% | 11.1% |
D4
medium
residues 505-517_595-684