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VP1
Euk-VirSaimiri_sciureus_polyomavirus_1
VP1__YP_009507668__Saimiri_sciureus_polyomavirus_1__1236410
Identity
- Accession:
- YP_009507668 ↗
- Protein ID:
- VP1
- Kingdom:
- euk
Quality
80.7
mean pLDDT
Taxonomy
Shotokuvirae›
Cossaviricota›
Papovaviricetes›
Sepolyvirales›
Polyomaviridae›
Betapolyomavirus›
Saimiri_sciureus_polyomavirus_1
TaxID: 1236410
Cluster
View cluster (117 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 43-91_111-283
Domain cluster:
rep: VP1__YP_009325930__Betapolyomavirus_securanorvegicus__1919247__D30-309
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00718.29 best | Polyoma_coat | 270.3 | 2.50e-80 | 78.4% | 58.8% |
| PF00718.29 | Polyoma_coat | 45.6 | 7.10e-12 | 22.5% | 16.9% |
D2
medium
residues 21-42_92-110_284-357