←Back to structures
VP1
Euk-VirScophthalmus_maximus_reovirus
VP1__YP_009507755__Scophthalmus_maximus_reovirus__994485
Identity
- Accession:
- YP_009507755 ↗
- Protein ID:
- VP1
- Kingdom:
- euk
Quality
80.9
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 433-693
Domain cluster:
rep: nsp16__YP_460023__Human_coronavirus_HKU1__290028__D2-282
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF21065.4 best | Reovirus_L2_MT1 | 299.1 | 4.50e-89 | 98.5% | 86.4% |
CATH (57)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3iylW03 | 3.40.50.10760 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Reovirus core | 0.91 | 84.0 | 8.66e-01 | 100.0% | 98.8% |
| 1ej6A03 | 3.40.50.10760 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Reovirus core | 0.90 | 88.0 | 8.81e-01 | 100.0% | 99.2% |
| 3trkA02 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.78 | 55.0 | 6.49e-01 | 87.7% | 100.0% |
| 5ezqA02 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.78 | 55.0 | 6.48e-01 | 88.9% | 100.0% |
| 4n49A00 | 3.40.50.12760 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.76 | 72.0 | 6.10e-01 | 99.2% | 90.0% |
| 2xyqA00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.73 | 62.0 | 6.05e-01 | 97.3% | 81.2% |
| 3douA00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.72 | 48.0 | 5.82e-01 | 70.1% | 98.9% |
| 1ej0A00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.72 | 49.0 | 5.92e-01 | 70.5% | 100.0% |
| 2plwA00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.71 | 49.0 | 5.87e-01 | 70.1% | 99.5% |
| 2nyuB00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.69 | 48.0 | 5.69e-01 | 70.1% | 99.5% |
| 1tjyA02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.69 | 41.0 | 5.27e-01 | 80.1% | 100.0% |
| 3dmgA01 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.69 | 40.0 | 4.85e-01 | 70.9% | 84.7% |
| 3g1wA02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.67 | 39.0 | 5.08e-01 | 74.7% | 100.0% |
| 2frxB01 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.66 | 51.0 | 4.92e-01 | 78.2% | 97.9% |
| 3e23A00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.66 | 45.0 | 5.19e-01 | 70.5% | 90.9% |
| 3ksmA02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.66 | 39.0 | 4.99e-01 | 77.0% | 100.0% |
| 4wzzA02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.66 | 41.0 | 5.08e-01 | 80.5% | 100.0% |
| 4qttB00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.65 | 44.0 | 5.29e-01 | 72.4% | 100.0% |
| 3c6kB03 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.65 | 46.0 | 5.36e-01 | 70.5% | 100.0% |
| 4zjpA02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.65 | 37.0 | 4.88e-01 | 75.9% | 100.0% |
| 1wznA01 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.65 | 43.0 | 4.99e-01 | 70.5% | 91.0% |
| 2zfuA02 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.65 | 40.0 | 5.09e-01 | 78.5% | 100.0% |
| 5f2kB02 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.65 | 45.0 | 4.94e-01 | 70.1% | 100.0% |
| 6yu8A01 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.64 | 58.0 | 5.87e-01 | 95.4% | 100.0% |
| 6jp6D01 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.64 | 53.0 | 5.73e-01 | 93.5% | 100.0% |
| 3lpmA01 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.63 | 44.0 | 4.81e-01 | 78.5% | 84.2% |
| 4krgA01 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.63 | 46.0 | 4.72e-01 | 73.6% | 84.7% |
| 1i9gA02 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.63 | 43.0 | 5.11e-01 | 89.3% | 98.9% |
| 2p8jA00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.63 | 44.0 | 4.91e-01 | 70.5% | 98.5% |
| 7vkkB01 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.62 | 45.0 | 4.82e-01 | 73.9% | 88.7% |
| 3tkaA01 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.62 | 43.0 | 5.12e-01 | 88.1% | 100.0% |
| 4dcmA02 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.61 | 40.0 | 4.78e-01 | 87.7% | 93.5% |
| 1hnnA00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.61 | 44.0 | 4.48e-01 | 73.2% | 93.9% |
| 3ocjA00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.61 | 45.0 | 4.33e-01 | 75.9% | 90.0% |
| 4ponA00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.61 | 40.0 | 4.84e-01 | 88.5% | 100.0% |
| 2pxxA00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.60 | 47.0 | 5.17e-01 | 80.8% | 97.7% |
| 2as0A03 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.60 | 48.0 | 5.27e-01 | 88.5% | 98.2% |
| 4dmgA03 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.60 | 46.0 | 5.15e-01 | 88.5% | 97.6% |
| 6mroA00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.60 | 42.0 | 4.83e-01 | 71.3% | 94.8% |
| 3dxyA00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.60 | 40.0 | 4.41e-01 | 70.5% | 82.1% |
| 2avnA00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.60 | 43.0 | 4.40e-01 | 72.0% | 92.3% |
| 1o54A02 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.60 | 43.0 | 4.97e-01 | 88.9% | 99.0% |
| 7wm5A01 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.60 | 44.0 | 4.92e-01 | 98.9% | 94.7% |
| 1o9gA01 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.59 | 45.0 | 5.08e-01 | 88.5% | 99.0% |
| 3g88A00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.59 | 46.0 | 4.81e-01 | 89.3% | 86.2% |
| 2yvlA02 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.59 | 42.0 | 4.92e-01 | 88.1% | 99.5% |
| 3c0kA03 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.59 | 46.0 | 5.11e-01 | 87.4% | 98.1% |
| 1xdzA00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.57 | 46.0 | 4.88e-01 | 89.3% | 92.4% |
| 4pneA00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.57 | 45.0 | 4.49e-01 | 81.2% | 100.0% |
| 1m6eX02 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.57 | 45.0 | 4.89e-01 | 89.3% | 100.0% |
| 4necC01 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.56 | 40.0 | 4.38e-01 | 72.4% | 93.6% |
| 1vlmA00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.56 | 40.0 | 4.46e-01 | 71.3% | 92.8% |
| 3b5iB01 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.56 | 48.0 | 4.93e-01 | 88.1% | 100.0% |
| 2efjA02 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.56 | 44.0 | 4.82e-01 | 89.3% | 100.0% |
| 7cluA02 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.55 | 41.0 | 4.41e-01 | 76.2% | 97.4% |
| 5gm2K01 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.55 | 44.0 | 4.86e-01 | 88.9% | 100.0% |
| 3mczA02 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.51 | 43.0 | 4.47e-01 | 89.3% | 97.2% |
ECOD (89)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 185352 | 2003.1.5.90 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Reovirus_L2_MT1 | 0.91 | 84.0 | 8.68e-01 | 99.6% | 100.0% |
| 1137615 | 2003.1.5.90 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Reovirus_L2_MT1 | 0.90 | 88.0 | 8.29e-01 | 100.0% | 86.4% |
| 2136844 | 2003.1.5.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases | 0.79 | 54.0 | 6.43e-01 | 87.7% | 97.8% |
| 1033210 | 2003.1.5.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases | 0.78 | 55.0 | 6.39e-01 | 88.9% | 96.9% |
| 3621648 | 2003.1.5.15 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › FtsJ | 0.77 | 73.0 | 5.53e-01 | 100.0% | 57.9% |
| 3395998 | 2003.1.5.15 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › FtsJ | 0.76 | 72.0 | 6.07e-01 | 99.2% | 86.0% |
| 4499367 | 2003.1.5.15 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › FtsJ | 0.76 | 72.0 | 6.18e-01 | 98.9% | 91.5% |
| 3929585 | 2003.1.5.15 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › FtsJ | 0.76 | 73.0 | 6.49e-01 | 100.0% | 93.7% |
| 4051520 | 2003.1.5.15 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › FtsJ | 0.76 | 72.0 | 6.08e-01 | 100.0% | 87.3% |
| 3498877 | 2003.1.5.15 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › FtsJ | 0.76 | 72.0 | 5.95e-01 | 100.0% | 89.8% |
| 3415740 | 2003.1.5.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases | 0.75 | 72.0 | 5.77e-01 | 100.0% | 78.3% |
| 3262175 | 2003.1.5.15 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › FtsJ | 0.75 | 71.0 | 5.96e-01 | 100.0% | 88.8% |
| 3244344 | 2003.1.5.15 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › FtsJ | 0.74 | 70.0 | 6.11e-01 | 100.0% | 86.4% |
| 3225847 | 2003.1.5.15 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › FtsJ | 0.73 | 70.0 | 5.68e-01 | 100.0% | 84.8% |
| 4030239 | 2003.1.5.15 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › FtsJ | 0.73 | 68.0 | 5.74e-01 | 98.1% | 91.0% |
| 3785963 | 2003.1.5.15 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › FtsJ | 0.71 | 55.0 | 5.75e-01 | 78.5% | 100.0% |
| 4075097 | 2003.1.5.15 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › FtsJ | 0.71 | 52.0 | 6.02e-01 | 73.9% | 100.0% |
| 3266012 | 2003.1.5.15 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › FtsJ | 0.71 | 52.0 | 5.58e-01 | 73.9% | 89.8% |
| 5032223 | 2003.1.5.15 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › FtsJ | 0.71 | 52.0 | 5.84e-01 | 74.3% | 98.0% |
| 4027282 | 2003.1.5.15 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › FtsJ | 0.71 | 53.0 | 4.89e-01 | 75.1% | 85.9% |
| 3176156 | 2003.1.5.15 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › FtsJ | 0.70 | 53.0 | 5.21e-01 | 76.6% | 96.7% |
| None | — | 0.70 | 53.0 | 5.88e-01 | 76.6% | 96.2% | |
| 4533168 | 2003.1.5.15 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › FtsJ | 0.70 | 52.0 | 5.83e-01 | 75.5% | 95.6% |
| 4945278 | 2003.1.5.15 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › FtsJ | 0.70 | 50.0 | 5.86e-01 | 88.9% | 100.0% |
| 4253110 | 2003.1.5.15 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › FtsJ | 0.70 | 51.0 | 5.29e-01 | 74.7% | 80.4% |
| None | — | 0.69 | 53.0 | 5.20e-01 | 77.4% | 82.2% | |
| 4947647 | 2003.1.5.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases | 0.69 | 45.0 | 5.26e-01 | 70.5% | 90.0% |
| 5078688 | 2003.1.5.15 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › FtsJ | 0.69 | 52.0 | 5.81e-01 | 89.3% | 96.2% |
| 3739337 | 2003.1.5.15 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › FtsJ | 0.68 | 50.0 | 5.05e-01 | 73.9% | 98.4% |
| 3346014 | 2003.1.5.66 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_11 | 0.67 | 50.0 | 4.88e-01 | 75.9% | 69.3% |
| 3650369 | 2003.1.5.115 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_29 | 0.67 | 46.0 | 4.44e-01 | 70.5% | 62.1% |
| 3271172 | 2003.1.5.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases | 0.67 | 49.0 | 5.08e-01 | 73.2% | 87.9% |
| 3386534 | 2003.1.5.6 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltr_RsmB-F | 0.67 | 49.0 | 4.84e-01 | 73.9% | 100.0% |
| 3704924 | 2003.1.5.6 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltr_RsmB-F | 0.67 | 52.0 | 4.88e-01 | 78.9% | 94.4% |
| 3703134 | 2003.1.5.17 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_5 | 0.66 | 48.0 | 4.53e-01 | 73.2% | 90.0% |
| 3717600 | 102.1.1.6 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › Methyltransf_5 | 0.66 | 48.0 | 4.90e-01 | 73.2% | 80.0% |
| None | — | 0.66 | 52.0 | 4.80e-01 | 79.7% | 93.8% | |
| None | — | 0.66 | 53.0 | 5.34e-01 | 81.6% | 92.3% | |
| 3713273 | 2003.1.5.6 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltr_RsmB-F | 0.66 | 51.0 | 4.12e-01 | 79.3% | 95.4% |
| 3401344 | 2003.1.5.6 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltr_RsmB-F | 0.66 | 51.0 | 4.57e-01 | 78.5% | 95.1% |
| 2756680 | 2003.1.5.6 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltr_RsmB-F | 0.66 | 51.0 | 4.56e-01 | 78.5% | 92.8% |
| 3622043 | 2003.1.5.82 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_31 | 0.66 | 56.0 | 5.53e-01 | 89.7% | 98.2% |
| 2095512 | 2003.1.5.13 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Spermine_synth | 0.66 | 46.0 | 4.96e-01 | 70.1% | 84.2% |
| 4219711 | 2003.1.5.17 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_5 | 0.65 | 47.0 | 4.81e-01 | 72.4% | 93.2% |
| 5039689 | 2003.1.5.5 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › UPF0020 | 0.65 | 44.0 | 5.31e-01 | 87.4% | 99.4% |
| 5001297 | 2003.1.5.5 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › UPF0020 | 0.65 | 45.0 | 5.32e-01 | 86.2% | 98.4% |
| 4204474 | 2003.1.5.17 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_5 | 0.64 | 45.0 | 4.50e-01 | 70.1% | 90.7% |
| 5040499 | 2003.1.5.6 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltr_RsmB-F | 0.64 | 50.0 | 4.69e-01 | 79.7% | 93.7% |
| 3414253 | 2003.1.5.82 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_31 | 0.64 | 52.0 | 5.50e-01 | 83.9% | 98.3% |
| 4337038 | 2003.1.5.17 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_5 | 0.64 | 45.0 | 4.87e-01 | 70.5% | 99.5% |
| 4469670 | 2003.1.5.17 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_5 | 0.64 | 45.0 | 4.86e-01 | 70.9% | 95.5% |
| 4083307 | 2003.1.5.17 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_5 | 0.64 | 45.0 | 4.75e-01 | 71.3% | 94.5% |
| 4434568 | 102.1.1.6 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › Methyltransf_5 | 0.64 | 45.0 | 5.10e-01 | 70.9% | 94.4% |
| 3971438 | 2003.1.5.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases | 0.64 | 44.0 | 4.94e-01 | 70.1% | 100.0% |
| 5059031 | 2003.1.5.5 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › UPF0020 | 0.63 | 45.0 | 5.22e-01 | 87.7% | 97.9% |
| 3272934 | 2003.1.5.15 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › FtsJ | 0.63 | 52.0 | 4.86e-01 | 84.7% | 93.3% |
| 4197803 | 2003.1.5.17 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_5 | 0.63 | 44.0 | 4.84e-01 | 70.1% | 100.0% |
| 4552604 | 2003.1.5.17 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_5 | 0.63 | 44.0 | 4.87e-01 | 70.1% | 99.5% |
| 4237810 | 2003.1.5.17 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_5 | 0.63 | 45.0 | 4.68e-01 | 71.3% | 84.1% |
| 5064244 | 2003.1.5.5 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › UPF0020 | 0.63 | 44.0 | 5.17e-01 | 87.7% | 99.5% |
| 4343468 | 2003.1.5.17 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_5 | 0.63 | 44.0 | 4.69e-01 | 71.3% | 87.2% |
| 4939667 | 2003.1.5.5 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › UPF0020 | 0.63 | 45.0 | 5.22e-01 | 90.4% | 97.9% |
| 4128686 | 2003.1.5.17 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_5 | 0.63 | 45.0 | 4.93e-01 | 72.4% | 100.0% |
| 4281922 | 2003.1.5.17 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_5 | 0.63 | 44.0 | 4.89e-01 | 70.9% | 96.7% |
| 4649282 | 2003.1.5.66 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_11 | 0.62 | 53.0 | 5.32e-01 | 87.7% | 97.3% |
| None | — | 0.62 | 43.0 | 4.80e-01 | 70.1% | 98.1% | |
| 4339753 | 2003.1.5.17 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_5 | 0.62 | 44.0 | 4.82e-01 | 71.3% | 100.0% |
| 3858888 | 2003.1.5.81 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_25 | 0.62 | 51.0 | 5.25e-01 | 85.4% | 99.2% |
| None | — | 0.61 | 47.0 | 5.06e-01 | 79.3% | 91.1% | |
| 3708567 | 2003.1.5.66 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_11 | 0.61 | 46.0 | 4.22e-01 | 76.6% | 82.4% |
| 3352743 | 2003.1.5.82 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_31 | 0.61 | 47.0 | 5.01e-01 | 78.9% | 89.6% |
| 4056269 | 2003.1.5.17 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_5 | 0.60 | 46.0 | 5.14e-01 | 88.5% | 98.1% |
| 5015049 | 2003.1.5.74 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltrans_SAM | 0.60 | 51.0 | 4.75e-01 | 89.3% | 95.7% |
| 3901892 | 2003.1.5.6 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltr_RsmB-F | 0.60 | 51.0 | 4.67e-01 | 88.1% | 100.0% |
| 3694522 | 2003.1.5.15 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › FtsJ | 0.60 | 52.0 | 5.20e-01 | 90.0% | 89.0% |
| 3201008 | 2003.1.5.368 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › PCMT, WBS_methylT, Methyltransf_25 | 0.59 | 49.0 | 4.81e-01 | 84.7% | 95.0% |
| 3606972 | 2003.1.5.66 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_11 | 0.59 | 45.0 | 4.74e-01 | 77.0% | 95.7% |
| 3638870 | 2003.1.5.269 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › WBS_methylT, Methyltransf_25 | 0.59 | 47.0 | 4.59e-01 | 81.2% | 79.3% |
| None | — | 0.59 | 47.0 | 5.04e-01 | 82.4% | 98.7% | |
| 4029908 | 2003.1.5.74 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltrans_SAM | 0.59 | 50.0 | 4.54e-01 | 88.9% | 94.0% |
| 1873097 | 2003.1.5.74 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltrans_SAM | 0.58 | 50.0 | 4.68e-01 | 89.7% | 95.6% |
| 3471344 | 2003.1.5.201 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_25, Methyltransf_31 | 0.58 | 45.0 | 4.74e-01 | 79.7% | 88.7% |
| None | — | 0.57 | 45.0 | 4.82e-01 | 89.3% | 91.7% | |
| 4423571 | 2003.1.5.25 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › GidB | 0.57 | 45.0 | 4.79e-01 | 89.3% | 90.2% |
| 3739573 | 2003.1.5.221 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_11, WBS_methylT | 0.57 | 46.0 | 4.57e-01 | 82.0% | 80.4% |
| 3693867 | 2003.1.5.66 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_11 | 0.57 | 45.0 | 4.77e-01 | 82.4% | 89.6% |
| 3599573 | 2003.1.5.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases | 0.57 | 45.0 | 4.51e-01 | 81.6% | 99.2% |
| 3800952 | 2003.1.5.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases | 0.56 | 45.0 | 4.87e-01 | 82.0% | 96.8% |
| 4565390 | 2003.1.5.25 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › GidB | 0.54 | 44.0 | 4.61e-01 | 89.3% | 92.1% |
D2
high
residues 807-988_1011-1029
Domain cluster:
rep: lambda_C__YP_009020573__Reptilian_orthoreovirus__226613__D790-1016
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF21066.4 best | Reovirus_L2_MT2 | 187.5 | 3.90e-55 | 91.5% | 78.8% |
D3
medium
residues 1-146
Domain cluster:
rep: VP1__YP_009351849__Fall_chinook_aquareovirus__1963254__D24-161
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF21064.3 best | Reovirus_L2_N | 133.9 | 6.00e-39 | 97.3% | 99.3% |
CATH (2)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3iylW01 | 3.90.1810.10 | Alpha Beta › Alpha-Beta Complex › Reovirus components fold › Reovirus components | 0.92 | 80.0 | 5.65e-01 | 89.7% | 34.0% |
| 1ej6A01 | 3.90.1810.10 | Alpha Beta › Alpha-Beta Complex › Reovirus components fold › Reovirus components | 0.85 | 72.0 | 5.13e-01 | 90.4% | 33.3% |
ECOD (7)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2992505 | 839.1.1.1 ↗ | a+b complex topology › Rotavirus NSP2 fragment, N-terminal domain › Rotavirus NSP2 fragment, N-terminal domain › Rotavirus NSP2 fragment, N-terminal domain › Reovirus_L2_N | 0.92 | 78.0 | 7.98e-01 | 87.7% | 90.8% |
| 1162283 | 839.1.1.0 ↗ | a+b complex topology › Rotavirus NSP2 fragment, N-terminal domain › Rotavirus NSP2 fragment, N-terminal domain › Rotavirus NSP2 fragment, N-terminal domain | 0.87 | 74.0 | 7.52e-01 | 89.7% | 89.5% |
| 1137618 | 839.1.1.0 ↗ | a+b complex topology › Rotavirus NSP2 fragment, N-terminal domain › Rotavirus NSP2 fragment, N-terminal domain › Rotavirus NSP2 fragment, N-terminal domain | 0.86 | 72.0 | 7.38e-01 | 90.4% | 90.0% |
| 3039259 | 839.1.1.1 ↗ | a+b complex topology › Rotavirus NSP2 fragment, N-terminal domain › Rotavirus NSP2 fragment, N-terminal domain › Rotavirus NSP2 fragment, N-terminal domain › Reovirus_L2_N | 0.86 | 72.0 | 7.37e-01 | 90.4% | 90.0% |
| 4507907 | 103.2.1.2 ↗ | alpha arrays › RuvA-C › ATP cone › ATP cone › ATP-cone | 0.70 | 33.0 | 4.21e-01 | 86.3% | 75.3% |
| 3211803 | 108.1.1.0 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand | 0.62 | 33.0 | 3.93e-01 | 74.0% | 75.8% |
| 5034715 | 5065.1.1.1 ↗ | alpha bundles › Type II ABC importer transmembrane domain fold › Type II ABC importer transmembrane domain fold › Type II ABC importer transmembrane domain fold › ABC-3 | 0.52 | 42.0 | 3.49e-01 | 88.4% | 81.7% |
D4
medium
residues 147-275
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF21063.2 best | Reovirus_L2_GTase | 90.2 | 1.90e-25 | 100.0% | 51.0% |
CATH (19)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3iylW01 | 3.90.1810.10 | Alpha Beta › Alpha-Beta Complex › Reovirus components fold › Reovirus components | 0.92 | 89.0 | 6.05e-01 | 100.0% | 33.5% |
| 1ej6A01 | 3.90.1810.10 | Alpha Beta › Alpha-Beta Complex › Reovirus components fold › Reovirus components | 0.89 | 84.0 | 5.77e-01 | 100.0% | 33.3% |
| 3mahA01 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.70 | 32.0 | 4.14e-01 | 75.2% | 77.1% |
| 2lrrA00 | 3.30.1370.50 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › R3H-like domain | 0.60 | 29.0 | 3.91e-01 | 72.1% | 85.7% |
| 1i94H01 | 3.30.1370.30 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › | 0.60 | 32.0 | 3.95e-01 | 73.6% | 84.6% |
| 5mmjh01 | 3.30.1370.30 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › | 0.60 | 32.0 | 3.97e-01 | 74.4% | 86.7% |
| 1s2oA02 | 3.90.1070.10 | Alpha Beta › Alpha-Beta Complex › Hypothetical Protein Ta0175; Chain: A, domain 2 › | 0.59 | 31.0 | 3.99e-01 | 76.0% | 91.5% |
| 2pt7G02 | 3.30.1370.180 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › | 0.58 | 30.0 | 3.94e-01 | 70.5% | 94.0% |
| 1i6uA01 | 3.30.1370.30 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › | 0.57 | 31.0 | 3.92e-01 | 73.6% | 95.6% |
| 3gkuA03 | 3.30.1370.50 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › R3H-like domain | 0.56 | 30.0 | 3.92e-01 | 82.2% | 94.4% |
| 3cgiA00 | 3.30.70.1710 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › BMC (bacterial microcompartment) domain | 0.56 | 32.0 | 3.41e-01 | 72.1% | 64.3% |
| 2ghpA03 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.55 | 29.0 | 3.55e-01 | 86.0% | 79.3% |
| 3ko2A00 | 3.10.28.10 | Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases | 0.54 | 39.0 | 3.62e-01 | 74.4% | 67.7% |
| 2qg3A00 | 3.30.1960.10 | Alpha Beta › 2-Layer Sandwich › SSo0622-like fold › tRNA wybutosine-synthesizing-like | 0.54 | 43.0 | 3.78e-01 | 86.0% | 86.6% |
| 3ezjA02 | 3.30.1370.120 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › | 0.53 | 23.0 | 3.00e-01 | 77.5% | 70.6% |
| 4ebrA00 | 3.30.1460.50 | Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › | 0.52 | 37.0 | 3.48e-01 | 73.6% | 67.5% |
| 1qexA03 | 2.60.40.1680 | Mainly Beta › Sandwich › Immunoglobulin-like › 4-oxalocrotonate tautomerase-like | 0.52 | 32.0 | 3.36e-01 | 94.6% | 67.5% |
| 2ab5A02 | 3.10.28.10 | Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases | 0.51 | 36.0 | 3.64e-01 | 73.6% | 76.9% |
| 3pgvA02 | 3.30.1240.10 | Alpha Beta › 2-Layer Sandwich › Hypothetical Protein, Haloacid Dehalogenase-like Hydrolase; Chain: A; domain 2 › | 0.50 | 35.0 | 3.89e-01 | 75.2% | 91.1% |
ECOD (28)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 185350 | 312.1.1.13 ↗ | a+b three layers › HIT-like › HIT-related › HIT-related › Reovirus_L2_GTase | 0.92 | 89.0 | 6.91e-01 | 100.0% | 52.6% |
| 2794451 | 312.1.1.13 ↗ | a+b three layers › HIT-like › HIT-related › HIT-related › Reovirus_L2_GTase | 0.89 | 84.0 | 6.52e-01 | 100.0% | 51.2% |
| 4993815 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.76 | 35.0 | 4.31e-01 | 70.5% | 67.1% |
| 5027689 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.74 | 34.0 | 4.24e-01 | 70.5% | 70.0% |
| 4972219 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.72 | 34.0 | 4.32e-01 | 70.5% | 76.0% |
| 4821455 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.70 | 34.0 | 3.77e-01 | 70.5% | 57.3% |
| 5022296 | 242.1.1.7 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 | 0.70 | 34.0 | 3.99e-01 | 70.5% | 64.2% |
| 3280548 | 306.6.1.0 ↗ | a+b two layers › Glucose permease domain IIB-like › PH0987 N-terminal domain-like › PH0987 N-terminal domain-like | 0.68 | 30.0 | 3.78e-01 | 72.9% | 67.5% |
| 4997133 | 306.3.1.1 ↗ | a+b two layers › Glucose permease domain IIB-like › eIF1-like › eIF1-like › SUI1 | 0.65 | 34.0 | 3.86e-01 | 72.1% | 67.4% |
| 4982909 | 871.1.1.1 ↗ | a+b two layers › SSo0622-like (Pfam 02676) › SSo0622-like (Pfam 02676) › SSo0622-like (Pfam 02676) › TYW3 | 0.61 | 47.0 | 4.12e-01 | 80.6% | 77.8% |
| 4029432 | 871.1.1.1 ↗ | a+b two layers › SSo0622-like (Pfam 02676) › SSo0622-like (Pfam 02676) › SSo0622-like (Pfam 02676) › TYW3 | 0.60 | 45.0 | 3.67e-01 | 79.1% | 82.1% |
| 4012898 | 320.1.1.0 ↗ | a+b two layers › R3H domain-like › R3H domain › R3H domain | 0.58 | 30.0 | 3.40e-01 | 71.3% | 63.0% |
| 4341023 | 320.2.1.1 ↗ | a+b two layers › R3H domain-like › Ribosomal protein S8, N-terminal domain › Ribosomal protein S8, N-terminal domain › Ribosomal_S8 | 0.58 | 29.0 | 3.85e-01 | 72.1% | 93.8% |
| 3780570 | 390.1.1.0 ↗ | few secondary structure elements › Hairpin loop containing domain-like › Hairpin loop containing domain-like › Hairpin loop containing domain-like | 0.58 | 29.0 | 3.48e-01 | 85.3% | 70.6% |
| 4939404 | 3501.1.1.0 ↗ | a+b two layers › protein PCC1 › protein PCC1 › protein PCC1 | 0.57 | 25.0 | 3.25e-01 | 77.5% | 71.4% |
| 2849954 | 320.2.1.1 ↗ | a+b two layers › R3H domain-like › Ribosomal protein S8, N-terminal domain › Ribosomal protein S8, N-terminal domain › Ribosomal_S8 | 0.57 | 32.0 | 3.90e-01 | 76.7% | 90.8% |
| 4017553 | 320.1.1.0 ↗ | a+b two layers › R3H domain-like › R3H domain › R3H domain | 0.57 | 32.0 | 3.65e-01 | 75.2% | 72.6% |
| 3900183 | 390.1.1.0 ↗ | few secondary structure elements › Hairpin loop containing domain-like › Hairpin loop containing domain-like › Hairpin loop containing domain-like | 0.57 | 29.0 | 3.38e-01 | 85.3% | 67.8% |
| 4930705 | 320.2.1.1 ↗ | a+b two layers › R3H domain-like › Ribosomal protein S8, N-terminal domain › Ribosomal protein S8, N-terminal domain › Ribosomal_S8 | 0.56 | 30.0 | 3.92e-01 | 73.6% | 100.0% |
| 3501995 | 390.1.1.0 ↗ | few secondary structure elements › Hairpin loop containing domain-like › Hairpin loop containing domain-like › Hairpin loop containing domain-like | 0.56 | 29.0 | 3.45e-01 | 85.3% | 71.8% |
| 3743748 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.56 | 30.0 | 3.49e-01 | 72.1% | 72.2% |
| 5033521 | 871.1.1.1 ↗ | a+b two layers › SSo0622-like (Pfam 02676) › SSo0622-like (Pfam 02676) › SSo0622-like (Pfam 02676) › TYW3 | 0.56 | 45.0 | 3.99e-01 | 85.3% | 91.4% |
| 5044155 | 871.1.1.1 ↗ | a+b two layers › SSo0622-like (Pfam 02676) › SSo0622-like (Pfam 02676) › SSo0622-like (Pfam 02676) › TYW3 | 0.56 | 44.0 | 3.89e-01 | 84.5% | 88.7% |
| 4065299 | 304.162.1.1 ↗ | a+b two layers › Alpha-beta plaits › Competence or damage-inducible protein CinA middle domain › Competence or damage-inducible protein CinA middle domain › CinA_KH | 0.55 | 27.0 | 3.42e-01 | 77.5% | 78.7% |
| 3987672 | 320.1.1.1 ↗ | a+b two layers › R3H domain-like › R3H domain › R3H domain › R3H | 0.55 | 29.0 | 3.82e-01 | 79.8% | 95.6% |
| 4010459 | 310.3.1.4 ↗ | a+b two layers › RRF/tRNA synthetase additional domain-like › General secretion pathway protein M (EpsM) periplasmic domain-related › General secretion pathway protein M (EpsM) periplasmic domain-related › GspL_C | 0.55 | 31.0 | 3.28e-01 | 77.5% | 58.3% |
| 4134167 | 2006.1.1.37 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › S6PP+Hydrolase_3 | 0.52 | 39.0 | 3.12e-01 | 79.8% | 79.6% |
| 4122798 | 242.1.1.6 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_WhiA | 0.50 | 35.0 | 3.87e-01 | 75.2% | 88.6% |
D5
medium
residues 276-397
D6
medium
residues 398-432_708-806_989-1010
Domain cluster:
rep: Lambda_C__YP_009246465__Mahlapitsi_orthoreovirus__2170064__D394-427_700-794
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF21062.3 best | Reovirus_L2_4th | 66.3 | 3.10e-18 | 76.3% | 85.5% |
CATH (5)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3iylW02 | 3.55.60.10 | Alpha Beta › 3-Layer(bab) Sandwich › Reovirus components fold › Reovirus components | 0.82 | 62.0 | 6.42e-01 | 78.2% | 89.9% |
| 1ej6A02 | 3.55.60.10 | Alpha Beta › 3-Layer(bab) Sandwich › Reovirus components fold › Reovirus components | 0.79 | 60.0 | 6.24e-01 | 78.8% | 89.9% |
| 2bkyX00 | 3.30.110.20 | Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › Alba-like domain | 0.53 | 27.0 | 3.51e-01 | 85.3% | 88.4% |
| 4gt8A00 | 3.30.565.10 | Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Histidine kinase-like ATPase, C-terminal domain | 0.52 | 30.0 | 3.22e-01 | 89.1% | 64.7% |
| 2v94B00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.52 | 28.0 | 3.45e-01 | 86.5% | 86.0% |
ECOD (7)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4113237 | 242.1.1.7 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 | 0.61 | 37.0 | 4.61e-01 | 94.9% | 98.9% |
| 5054060 | 310.3.1.0 ↗ | a+b two layers › RRF/tRNA synthetase additional domain-like › General secretion pathway protein M (EpsM) periplasmic domain-related › General secretion pathway protein M (EpsM) periplasmic domain-related | 0.58 | 30.0 | 3.81e-01 | 87.8% | 88.2% |
| 3977348 | 225.1.1.3 ↗ | a+b two layers › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › HATPase_c | 0.52 | 31.0 | 3.28e-01 | 85.3% | 63.6% |
| 4943278 | 304.109.1.0 ↗ | a+b two layers › Alpha-beta plaits › Ribosomal proteins S24e, L23 and L15e › Ribosomal proteins S24e, L23 and L15e | 0.51 | 28.0 | 3.47e-01 | 86.5% | 86.3% |
| 4994641 | 304.19.1.1 ↗ | a+b two layers › Alpha-beta plaits › eIF-2-alpha, C-terminal domain › eIF-2-alpha, C-terminal domain › EIF_2_alpha | 0.51 | 23.0 | 2.82e-01 | 89.1% | 61.1% |
| 4010324 | 225.1.1.3 ↗ | a+b two layers › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › HATPase_c | 0.50 | 30.0 | 3.18e-01 | 82.1% | 62.9% |
| 5064549 | 304.109.1.0 ↗ | a+b two layers › Alpha-beta plaits › Ribosomal proteins S24e, L23 and L15e › Ribosomal proteins S24e, L23 and L15e | 0.50 | 28.0 | 3.46e-01 | 98.1% | 91.1% |
D7
medium
residues 1047-1125
D8
medium
residues 1228-1297
Domain cluster:
rep: lambda_C__YP_009020573__Reptilian_orthoreovirus__226613__D1214-1281
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF06016.18 best | Reovirus_L2_8th | 52.5 | 6.00e-14 | 94.3% | 100.0% |