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VP1
Euk-VirPhilantomba_monticola_polyomavirus_1
VP1__YP_009553186__Philantomba_monticola_polyomavirus_1__2170411
Identity
- Accession:
- YP_009553186 ↗
- Protein ID:
- VP1
- Kingdom:
- euk
Quality
72.4
mean pLDDT
Taxonomy
Shotokuvirae›
Cossaviricota›
Papovaviricetes›
Sepolyvirales›
Polyomaviridae›
Alphapolyomavirus›
Philantomba_monticola_polyomavirus_1
TaxID: 2170411
Cluster
View cluster (117 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 33-60_106-136_261-286_309-364
Domain cluster:
rep: VP1__YP_009551976__Tupaia_glis_polyomavirus_1__2170402__D33-54_101-134_245-326
Pfam (4)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00718.29 best | Polyoma_coat | 51.9 | 8.50e-14 | 26.2% | 12.5% |
| PF00718.29 | Polyoma_coat | 49.2 | 5.70e-13 | 23.4% | 10.5% |
| PF00718.29 | Polyoma_coat | 42.8 | 5.00e-11 | 20.6% | 9.1% |
| PF00718.29 | Polyoma_coat | 27.9 | 1.70e-06 | 19.1% | 8.8% |
D2
medium
residues 61-105_137-260_287-308
Domain cluster:
rep: major_structural_protein_VP1__YP_007346983__Otomops_polyomavirus_KY157__2035999__D87-106_144-241_279-300
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00718.29 best | Polyoma_coat | 144.0 | 7.30e-42 | 73.8% | 42.2% |