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VP1
Euk-VirSeal_parvovirus
VP1__YP_010086571__Seal_parvovirus__1427158
Identity
- Accession:
- YP_010086571 ↗
- Protein ID:
- VP1
- Kingdom:
- euk
Quality
58.1
mean pLDDT
Taxonomy
Shotokuvirae›
Cossaviricota›
Quintoviricetes›
Piccovirales›
Parvoviridae›
Erythroparvovirus›
Seal_parvovirus
TaxID: 1427158
Cluster
View cluster (6 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 37-116
D2
high
residues 303-515_704-834
Domain cluster:
rep: VP2__YP_009508801__Miniopterus_schreibersii_bat_bocavirus__1911554__D51-253_470-529
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00740.24 best | VP1_2 | 162.8 | 1.60e-47 | 62.2% | 39.8% |
| PF00740.24 | VP1_2 | 61.0 | 1.20e-16 | 31.7% | 16.6% |
D3
medium
residues 175-281
Domain cluster:
rep: capsid_protein_VP1__YP_009508795__Bat_bocavirus_XM30__2259811__D8-95
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF08398.16 best | Phospholip_A2_4 | 87.7 | 6.80e-25 | 72.9% | 97.5% |
D4
medium
residues 592-703