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VP1
Euk-VirMurine_adeno-associated_virus_1
VP1__YP_010086820__Murine_adeno-associated_virus_1__2171377
Identity
- Accession:
- YP_010086820 ↗
- Protein ID:
- VP1
- Kingdom:
- euk
Quality
68.2
mean pLDDT
Taxonomy
Shotokuvirae›
Cossaviricota›
Quintoviricetes›
Piccovirales›
Parvoviridae›
Dependoparvovirus›
Murine_adeno-associated_virus_1
TaxID: 2171377
Cluster
View cluster (92 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 36-123
Domain cluster:
rep: capsid_protein_VP1__YP_009508795__Bat_bocavirus_XM30__2259811__D8-95
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF08398.16 best | Phospholip_A2_4 | 91.7 | 4.00e-26 | 90.9% | 98.8% |
D2
high
residues 217-415_617-694
Domain cluster:
rep: VP2__YP_009508801__Miniopterus_schreibersii_bat_bocavirus__1911554__D51-253_470-529
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00740.24 best | VP1_2 | 248.4 | 1.90e-73 | 72.2% | 41.7% |
| PF00740.24 | VP1_2 | 92.2 | 4.30e-26 | 29.2% | 13.3% |
D3
medium
residues 489-563