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VP1_protein
Euk-VirBat_bocavirus
VP1_protein__YP_009229910__Bat_bocavirus__1329649
Identity
- Accession:
- YP_009229910 ↗
- Protein ID:
- VP1_protein
- Kingdom:
- euk
Quality
71.2
mean pLDDT
Taxonomy
Shotokuvirae›
Cossaviricota›
Quintoviricetes›
Piccovirales›
Parvoviridae›
Bocaparvovirus›
Bat_bocavirus
TaxID: 1329649
Cluster
View cluster (92 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 185-390_570-691
Domain cluster:
rep: VP2__YP_009508801__Miniopterus_schreibersii_bat_bocavirus__1911554__D51-253_470-529
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00740.24 best | VP1_2 | 134.6 | 5.90e-39 | 64.6% | 39.4% |
| PF00740.24 | VP1_2 | 32.2 | 6.20e-08 | 29.0% | 14.5% |
D2
medium
residues 11-96
Domain cluster:
rep: capsid_protein_VP1__YP_009508795__Bat_bocavirus_XM30__2259811__D8-95
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF08398.16 best | Phospholip_A2_4 | 105.2 | 2.50e-30 | 90.7% | 97.5% |
D3
medium
residues 446-502