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VP1_structutal_protein
Euk-VirSquirrel_monkey_polyomavirus
VP1_structutal_protein__YP_001531348__Squirrel_monkey_polyomavirus__452475
Identity
- Accession:
- YP_001531348 ↗
- Protein ID:
- VP1_structutal_protein
- Kingdom:
- euk
Quality
87.5
mean pLDDT
Cluster
View cluster (117 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 46-97_131-292
Domain cluster:
rep: major_structural_protein_VP1__YP_007346983__Otomops_polyomavirus_KY157__2035999__D87-106_144-241_279-300
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00718.29 best | Polyoma_coat | 261.7 | 1.00e-77 | 76.2% | 54.0% |
| PF00718.29 | Polyoma_coat | 56.0 | 4.60e-15 | 26.2% | 17.9% |
D2
medium
residues 21-45_98-130_293-326
Domain cluster:
representative
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00718.29 best | Polyoma_coat | 40.5 | 2.60e-10 | 37.0% | 11.2% |
| PF00718.29 | Polyoma_coat | 28.4 | 1.20e-06 | 30.4% | 9.1% |