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VP2-4-3_polyprotein
Euk-VirInfectious_bursal_disease_virus
VP2-4-3_polyprotein__NP_690838__Infectious_bursal_disease_virus__10995
Identity
- Accession:
- NP_690838 ↗
- Protein ID:
- VP2-4-3_polyprotein
- Kingdom:
- euk
Quality
51.6
mean pLDDT
Cluster
View cluster (4 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 37-177_343-392
D2
high
residues 195-337
D3
high
residues 556-708
D4
high
residues 918-974
Domain cluster:
rep: polyprotein__YP_009177608__Tasmanian_aquabirnavirus__1721090__D882-933
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF01767.22 best | Birna_VP3 | 95.9 | 5.80e-27 | 100.0% | 24.2% |
D5
medium
residues 393-433_456-478
D6
medium
residues 848-913
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF01767.22 best | Birna_VP3 | 107.7 | 1.50e-30 | 100.0% | 28.6% |
CATH (5)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2r18A01 | 1.10.150.620 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Capsid protein VP3, domain 1 | 0.97 | 90.0 | 8.80e-01 | 97.0% | 91.4% |
| 3deeA01 | 1.10.150.690 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › DUF2063 | 0.64 | 44.0 | 4.09e-01 | 72.7% | 80.2% |
| 2gytA01 | 1.10.287.2070 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.52 | 39.0 | 3.81e-01 | 81.8% | 87.3% |
| 1txgA02 | 1.10.1040.10 | Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 | 0.51 | 39.0 | 3.09e-01 | 86.4% | 100.0% |
| 1w36D01 | 1.10.10.1020 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › RecBCD complex, subunit RecD, N-terminal domain | 0.51 | 38.0 | 3.31e-01 | 83.3% | 99.1% |