←Back to structures
VP2
Euk-VirRat_bocavirus
VP2__YP_009227294__Rat_bocavirus__1788315
Identity
- Accession:
- YP_009227294 ↗
- Protein ID:
- VP2
- Kingdom:
- euk
Quality
72.0
mean pLDDT
Taxonomy
Shotokuvirae›
Cossaviricota›
Quintoviricetes›
Piccovirales›
Parvoviridae›
Bocaparvovirus›
Rat_bocavirus
TaxID: 1788315
Cluster
View cluster (92 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 55-258_445-565
Domain cluster:
rep: VP2__YP_009508801__Miniopterus_schreibersii_bat_bocavirus__1911554__D51-253_470-529
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00740.24 best | VP1_2 | 139.7 | 1.70e-40 | 63.7% | 39.8% |
| PF00740.24 | VP1_2 | 38.0 | 1.10e-09 | 29.5% | 15.2% |
D2
medium
residues 279-318_368-380_400-444