VP2

Euk-Vir

Gray_fox_amdovirus

VP2__YP_009507345__Gray_fox_amdovirus__1093101

Identity

50.6 mean pLDDT

Shotokuvirae› Cossaviricota› Quintoviricetes› Piccovirales› Parvoviridae› Amdoparvovirus› Gray_fox_amdovirus

TaxID: 1093101

View cluster (20 members)

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high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 32-53_104-127_499-565

PDB

Domain cluster: representative

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF00740.24 best	VP1_2	73.8	1.60e-20	54.0%	10.7%

CATH (4)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
1c8dA00	2.170.30.10	Mainly Beta › Beta Complex › Empty Capsid Viral Protein 2 › Parvovirus coat protein VP1/VP2	0.89	86.0	5.28e-01	100.0%	87.6%
2g8gA00	2.170.30.10	Mainly Beta › Beta Complex › Empty Capsid Viral Protein 2 › Parvovirus coat protein VP1/VP2	0.80	76.0	4.75e-01	100.0%	86.1%
4qc8A00	2.170.30.10	Mainly Beta › Beta Complex › Empty Capsid Viral Protein 2 › Parvovirus coat protein VP1/VP2	0.77	73.0	4.60e-01	100.0%	85.3%
1s58A00	2.170.30.10	Mainly Beta › Beta Complex › Empty Capsid Viral Protein 2 › Parvovirus coat protein VP1/VP2	0.75	70.0	4.42e-01	100.0%	84.9%

ECOD (1)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4884619	10.2.1.9 ↗	beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Parvo_coat	0.90	86.0	5.28e-01	100.0%	86.4%

D2 medium residues 54-103_128-274_566-592

PDB