VP2

Euk-Vir

California_sea_lion_bocavirus_1

VP2__YP_009507353__California_sea_lion_bocavirus_1__1073959

Identity

76.9 mean pLDDT

Shotokuvirae› Cossaviricota› Quintoviricetes› Piccovirales› Parvoviridae› Bocaparvovirus› California_sea_lion_bocavirus_1

TaxID: 1073959

View cluster (92 members)

Download PDB Download Scores JSON

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 52-264_461-532

PDB

Domain cluster: rep: VP2__YP_009508801__Miniopterus_schreibersii_bat_bocavirus__1911554__D51-253_470-529

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF00740.24 best	VP1_2	137.4	8.20e-40	75.8%	39.4%

D2 medium residues 268-460

PDB

Domain cluster: representative

ECOD (1)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3107798	10.2.1.9 ↗	beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Parvo_coat	0.68	65.0	4.55e-01	100.0%	67.5%