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VP2_protein
Euk-VirCorriparta_virus
VP2_protein__YP_009507675__Corriparta_virus__40053
Identity
- Accession:
- YP_009507675 ↗
- Protein ID:
- VP2_protein
- Kingdom:
- euk
Quality
81.3
mean pLDDT
Cluster
View cluster (13 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 333-638
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF01700.23 best | Orbi_VP3 | 511.7 | 4.30e-153 | 100.0% | 34.3% |
ECOD (3)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1409638 | 4064.1.1.1 ↗ | a+b complex topology › Inner layer core protein p3-related › Inner layer core protein p3-related › Inner layer core protein p3-related › Orbi_VP3 | 0.92 | 90.0 | 6.17e-01 | 100.0% | 34.5% |
| 4958201 | 604.39.1.1 ↗ | alpha bundles › Spectrin repeat-like › S-component of energy-coupling factor (ECF) transporters › S-component of energy-coupling factor (ECF) transporters › CbiM | 0.51 | 30.0 | 3.55e-01 | 86.9% | 81.0% |
| 5044518 | 604.39.1.0 ↗ | alpha bundles › Spectrin repeat-like › S-component of energy-coupling factor (ECF) transporters › S-component of energy-coupling factor (ECF) transporters | 0.51 | 30.0 | 3.81e-01 | 86.6% | 95.0% |
D2
high
residues 749-913
Domain cluster:
rep: VP3__YP_009507697__Eubenangee_virus__40056__D698-861
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF01700.23 best | Orbi_VP3 | 200.8 | 3.90e-59 | 100.0% | 18.4% |
D3
medium
residues 131-277
Domain cluster:
rep: VP3__YP_009345881__Orbivirus_SX-2017a__1955493__D82-117_141-226
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF01700.23 best | Orbi_VP3 | 185.0 | 2.30e-54 | 100.0% | 16.6% |
D4
medium
residues 278-332_932-948
Domain cluster:
rep: VP3__YP_009507724__Orungo_virus__40058__D231-275_885-906
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF01700.23 best | Orbi_VP3 | 87.1 | 8.70e-25 | 95.8% | 6.8% |
D5
medium
residues 639-690
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF01700.23 best | Orbi_VP3 | 57.6 | 7.40e-16 | 100.0% | 5.9% |
CATH (1)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3doeB00 | 1.20.1520.10 | Mainly Alpha › Up-down Bundle › Adp-ribosylation factor-like protein 2-binding protein fold › ADP-ribosylation factor-like 2-binding protein, domain | 0.64 | 53.0 | 4.03e-01 | 88.5% | 50.0% |
D6
medium
residues 691-743
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF01700.23 best | Orbi_VP3 | 48.5 | 3.90e-13 | 100.0% | 5.8% |