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VP39
Euk-VirPlodia_interpunctella_granulovirus
VP39__YP_009330215__Plodia_interpunctella_granulovirus__262175
Identity
- Accession:
- YP_009330215 ↗
- Protein ID:
- VP39
- Kingdom:
- euk
Quality
73.7
mean pLDDT
Taxonomy
TaxID: 262175
Cluster
View cluster (46 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 35-89_170-286
Domain cluster:
representative
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF04501.18 best | Baculo_VP39 | 55.6 | 8.30e-15 | 36.6% | 24.2% |
| PF04501.18 | Baculo_VP39 | 67.0 | 2.70e-18 | 36.6% | 22.5% |
CATH (1)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1qu6A02 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.52 | 21.0 | 3.01e-01 | 90.7% | 77.6% |
ECOD (2)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3934685 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.53 | 22.0 | 2.93e-01 | 87.8% | 70.6% |
| 3188937 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.52 | 26.0 | 3.24e-01 | 89.5% | 77.0% |