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VP39_capsid

Euk-Vir

Artogeia_rapae_granulovirus

VP39_capsid__YP_003429405__Artogeia_rapae_granulovirus__362830

Identity

Accession:
YP_003429405 ↗
Protein ID:
VP39_capsid
Kingdom:
euk

Quality

72.5 mean pLDDT

Taxonomy

Naldaviricetes› Lefavirales› Baculoviridae› Betabaculovirus› Betabaculovirus_arrapae

TaxID: 362830

Cluster

View cluster (46 members)

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 29-89_194-286
PDB
Domain cluster: rep: VP39__YP_009330215__Plodia_interpunctella_granulovirus__262175__D35-89_170-286
Pfam (2)
AccessionNameScoreE-valueQ covHMM cov
PF04501.18 best Baculo_VP39 78.8 6.60e-22 39.6% 24.2%
PF04501.18 Baculo_VP39 32.5 9.00e-08 26.0% 15.6%
D2 medium residues 90-193
PDB
Domain cluster: rep: VP39__YP_009091927__Erinnyis_ello_granulovirus__307444__D90-190
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF04501.18 best Baculo_VP39 66.7 3.20e-18 100.0% 47.5%