←Back to structures
VP39_capsid
Euk-VirSpodoptera_littoralis_nucleopolyhedrovirus
VP39_capsid__YP_009505885__Spodoptera_littoralis_nucleopolyhedrovirus__10456
Identity
- Accession:
- YP_009505885 ↗
- Protein ID:
- VP39_capsid
- Kingdom:
- euk
Quality
73.1
mean pLDDT
Taxonomy
Naldaviricetes›
Lefavirales›
Baculoviridae›
Alphabaculovirus›
Spodoptera_littoralis_nucleopolyhedrovirus
TaxID: 10456
Cluster
View cluster (46 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 16-89
Domain cluster:
rep: vp39__YP_010086341__Hyposidra_talaca_nucleopolyhedrovirus__1070315__D23-87
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF04501.18 best | Baculo_VP39 | 61.5 | 1.30e-16 | 100.0% | 30.7% |
D2
medium
residues 90-105_173-241_277-293
Domain cluster:
rep: VP39__YP_009666419__Lonomia_obliqua_multiple_nucleopolyhedrovirus__134394__D175-245_296-307
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF04501.18 best | Baculo_VP39 | 44.6 | 1.90e-11 | 65.7% | 24.2% |
D3
medium
residues 106-172
Domain cluster:
rep: VP39__YP_009666419__Lonomia_obliqua_multiple_nucleopolyhedrovirus__134394__D49-56_94-162
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF04501.18 best | Baculo_VP39 | 45.7 | 8.30e-12 | 100.0% | 29.1% |