←Back to structures
VP3
Euk-VirFall_chinook_aquareovirus
VP3__YP_009351851__Fall_chinook_aquareovirus__1963254
Identity
- Accession:
- YP_009351851 ↗
- Protein ID:
- VP3
- Kingdom:
- euk
Quality
75.3
mean pLDDT
Cluster
View cluster (8 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 971-1145
Domain cluster:
rep: VP3__YP_001837096__American_grass_carp_reovirus__465447__D979-1148
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF22033.2 best | Lamba1_VP3 | 250.6 | 3.90e-74 | 100.0% | 18.3% |
D2
medium
residues 194-281_315-343
D3
medium
residues 344-372_1147-1190
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF22033.2 best | Lamba1_VP3 | 41.9 | 4.30e-11 | 61.6% | 4.5% |
ECOD (2)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2992478 | 4064.1.1.7 ↗ | a+b complex topology › Inner layer core protein p3-related › Inner layer core protein p3-related › Inner layer core protein p3-related › Lamba1_VP3 | 0.88 | 83.0 | 4.49e-01 | 100.0% | 78.8% |
| 4881251 | 4064.1.1.7 ↗ | a+b complex topology › Inner layer core protein p3-related › Inner layer core protein p3-related › Inner layer core protein p3-related › Lamba1_VP3 | 0.80 | 49.0 | 2.73e-01 | 90.4% | 5.7% |
D4
medium
residues 373-442
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF22033.2 best | Lamba1_VP3 | 89.5 | 1.80e-25 | 100.0% | 7.3% |
D5
medium
residues 482-518_680-690_717-727_814-838
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF22033.2 best | Lamba1_VP3 | 33.2 | 1.80e-08 | 47.6% | 3.8% |
CATH (2)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1t02A02 | 3.90.770.10 | Alpha Beta › Alpha-Beta Complex › 3-hydroxy-3-methylglutaryl-coenzyme A Reductase; Chain A, domain 2 › 3-hydroxy-3-methylglutaryl-coenzyme A Reductase; Chain A, domain 2 | 0.51 | 35.0 | 2.51e-01 | 70.2% | 40.2% |
| 2kinB01 | 1.20.58.980 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.51 | 25.0 | 2.55e-01 | 75.0% | 45.0% |
D6
medium
residues 839-950
Domain cluster:
rep: putative_NTPase_RNA_helicase__YP_009259509__Etheostoma_fonticola_aquareovirus__1862978__D843-936
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF22033.2 best | Lamba1_VP3 | 154.1 | 5.60e-45 | 100.0% | 11.6% |