VP3_protein

Euk-Vir

Blotched_snakehead_virus

VP3_protein__YP_052872__Blotched_snakehead_virus__311176

Identity

70.2 mean pLDDT

Orthornavirae› Birnaviridae› Blosnavirus› Blotched_snakehead_virus

TaxID: 311176

Singleton — not in a non-trivial cluster

Download PDB Download Scores JSON

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 104-162

PDB

Domain cluster: representative

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF01767.22 best	Birna_VP3	87.5	2.20e-24	100.0%	25.1%

CATH (4)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
2r18A01	1.10.150.620	Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Capsid protein VP3, domain 1	0.97	77.0	7.23e-01	83.1%	70.0%
1lkoA01	1.20.1260.10	Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle	0.73	62.0	4.61e-01	93.2%	95.9%
1wj7A01	1.10.8.10	Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain	0.62	43.0	4.31e-01	74.6%	75.0%
5bqpD00	3.40.50.2020	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold ›	0.55	42.0	3.00e-01	83.1%	62.5%

ECOD (1)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3966548	4953.1.1.0 ↗	beta barrels › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like	0.54	41.0	3.85e-01	84.7%	73.3%

D2 high residues 181-239

PDB

Domain cluster: rep: polyprotein__YP_009177608__Tasmanian_aquabirnavirus__1721090__D882-933

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF01767.22 best	Birna_VP3	100.1	3.00e-28	98.3%	25.6%

D3 medium residues 25-97

PDB