←Back to structures
V_protein
Euk-VirMapuera_orthorubulavirus
V_protein__ABL84841__Mapuera_orthorubulavirus__2560582
Identity
- Accession:
- ABL84841 ↗
- Protein ID:
- V_protein
- Kingdom:
- euk
Quality
53.9
mean pLDDT
Taxonomy
Orthornavirae›
Negarnaviricota›
Monjiviricetes›
Mononegavirales›
Paramyxoviridae›
Orthorubulavirus›
Orthorubulavirus_mapueraense
TaxID: 2560582
Cluster
View cluster (13 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 98-111_158-221
Domain cluster:
rep: V_protein__YP_010087169__Alston_virus__2495433__D112-135_169-222
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF13008.14 best | zf-Paramyx-P | 67.1 | 9.40e-19 | 57.7% | 97.8% |
CATH (6)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3aonA00 | 1.10.287.3240 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.53 | 36.0 | 2.77e-01 | 71.8% | 33.0% |
| 2kvtA00 | 3.30.730.30 | Alpha Beta › 2-Layer Sandwich › GCC-box Binding Domain › YaiA protein | 0.52 | 33.0 | 3.40e-01 | 78.2% | 69.0% |
| 6h8oA00 | 3.40.1310.20 | Alpha Beta › 3-Layer(aba) Sandwich › Replication Protein E1; Chain: A, › | 0.51 | 37.0 | 3.48e-01 | 75.6% | 95.8% |
| 2gjhA00 | 3.30.1070.20 | Alpha Beta › 2-Layer Sandwich › Cell Cycle; Chain A › | 0.51 | 33.0 | 3.83e-01 | 87.2% | 93.0% |
| 1jw3A00 | 3.55.10.10 | Alpha Beta › 3-Layer(bab) Sandwich › Archease, Possible Chaperone; Chain: A; domain 1 › Archease domain | 0.50 | 35.0 | 2.88e-01 | 87.2% | 40.7% |
| 4wxaA00 | 3.30.310.50 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Alpha-D-phosphohexomutase, C-terminal domain | 0.50 | 36.0 | 3.50e-01 | 92.3% | 69.0% |
ECOD (12)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4954236 | 4081.1.1.12 ↗ | beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related › DUF2207 | 0.56 | 41.0 | 3.10e-01 | 91.0% | 31.3% |
| 4491822 | 312.1.1.5 ↗ | a+b three layers › HIT-like › HIT-related › HIT-related › GalP_UDP_tr_C | 0.55 | 47.0 | 3.46e-01 | 96.2% | 88.1% |
| 4513159 | 312.1.1.5 ↗ | a+b three layers › HIT-like › HIT-related › HIT-related › GalP_UDP_tr_C | 0.54 | 47.0 | 3.63e-01 | 96.2% | 87.4% |
| 3213216 | 70.3.1.1 ↗ | beta barrels › beta-clip › SET domain-like › SET domain-like › SET | 0.53 | 44.0 | 3.35e-01 | 91.0% | 75.6% |
| 4880974 | 1.1.7.30 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Astro_capsid_p | 0.53 | 45.0 | 3.33e-01 | 97.4% | 81.7% |
| 2325048 | 331.3.1.18 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › DAPG_hydrolase | 0.53 | 45.0 | 3.12e-01 | 97.4% | 67.1% |
| 3926022 | 384.1.1.0 ↗ | few secondary structure elements › BPTI-like › BPTI-like › BPTI-like | 0.52 | 31.0 | 3.34e-01 | 70.5% | 71.4% |
| 3782670 | 314.1.1.6 ↗ | a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › BPL_LplA_LipB | 0.52 | 45.0 | 3.09e-01 | 96.2% | 70.9% |
| 3738408 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.52 | 32.0 | 3.19e-01 | 91.0% | 60.0% |
| 3608890 | 314.1.1.6 ↗ | a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › BPL_LplA_LipB | 0.51 | 44.0 | 3.13e-01 | 96.2% | 64.2% |
| 4029991 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.50 | 35.0 | 2.27e-01 | 73.1% | 19.0% |
| 3964010 | 314.1.1.6 ↗ | a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › BPL_LplA_LipB | 0.50 | 44.0 | 3.20e-01 | 96.2% | 73.8% |