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Vpg

Euk-Vir

Blackberry_virus_Y

Vpg__YP_851205__Blackberry_virus_Y__323118

Identity

Accession:
YP_851205 ↗
Protein ID:
Vpg
Kingdom:
euk

Quality

78.6 mean pLDDT

Cluster

View cluster (80 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 10-55
PDB
Domain cluster: representative
CATH (1)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3axsA02 3.30.56.70 Alpha Beta › 2-Layer Sandwich › Phenylalanyl-tRNA Synthetase; Chain B, domain 1 › N2,N2-dimethylguanosine tRNA methyltransferase, C-terminal domain 0.55 32.0 2.83e-01 100.0% 40.0%
ECOD (1)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4134779 2007.2.5.3 ↗ a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › Rhodanese/Cell cycle control phosphatase › Rhodanese, Rhodanese_C 0.50 39.0 2.73e-01 100.0% 31.9%
D2 high residues 79-189
PDB
Domain cluster: rep: NIa-VPg__YP_010088104__Passiflora_edulis_symptomless_virus__2294149__D66-176