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YKV_MT-4_like_protein

Euk-Vir

Murmansk_poxvirus

YKV_MT-4_like_protein__YP_009408364__Murmansk_poxvirus__2025359

Identity

Accession:
YP_009408364 ↗
Protein ID:
YKV_MT-4_like_protein
Kingdom:
euk

Quality

74.0 mean pLDDT

Taxonomy

Bamfordvirae› Nucleocytoviricota› Pokkesviricetes› Chitovirales› Poxviridae› Centapoxvirus› Murmansk_poxvirus

TaxID: 2025359

Cluster

View cluster (92 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 27-191
PDB
Domain cluster: rep: Viral_TNFR_II-like_c-terminal_fragment__YP_227393__Deerpox_virus_W-848-83__305674__D31-193
Pfam (2)
AccessionNameScoreE-valueQ covHMM cov
PF04490.18 best Pox_T4_C 25.5 1.90e-05 71.5% 79.5%
PF04491.17 Pox_T4_N 58.2 8.00e-16 27.3% 97.8%
CATH (11)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4hkjD00 2.60.240.30 Mainly Beta › Sandwich › Viral Chemokine Inhibitor; Chain A › 0.87 84.0 8.04e-01 100.0% 90.9%
3on9A00 2.60.240.20 Mainly Beta › Sandwich › Viral Chemokine Inhibitor; Chain A › 0.78 69.0 6.99e-01 100.0% 95.6%
1t7vA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.71 33.0 4.39e-01 70.9% 81.1%
2vgaA00 2.60.240.10 Mainly Beta › Sandwich › Viral Chemokine Inhibitor; Chain A › Major secreted virus protein 0.69 65.0 6.14e-01 100.0% 95.9%
4bfeA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.68 31.0 4.27e-01 81.8% 86.4%
2k8qA00 2.60.40.790 Mainly Beta › Sandwich › Immunoglobulin-like › 0.63 34.0 3.79e-01 72.1% 64.2%
1y0hB00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.62 36.0 4.56e-01 82.4% 96.9%
1hdhA02 3.30.1120.10 Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › 0.61 27.0 3.83e-01 90.3% 87.0%
1wfiA00 2.60.40.790 Mainly Beta › Sandwich › Immunoglobulin-like › 0.56 34.0 3.72e-01 76.4% 72.5%
3c18A01 3.30.460.10 Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 0.52 31.0 3.66e-01 89.1% 83.5%
4azsA02 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.50 26.0 3.42e-01 81.2% 95.1%
ECOD (8)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
221111 527.1.1.2 ↗ beta sandwiches › Soluble secreted chemokine inhibitor, VCCI › Soluble secreted chemokine inhibitor, VCCI › Soluble secreted chemokine inhibitor, VCCI 0.87 84.0 8.04e-01 100.0% 90.9%
146301 527.1.1.3 ↗ beta sandwiches › Soluble secreted chemokine inhibitor, VCCI › Soluble secreted chemokine inhibitor, VCCI › Soluble secreted chemokine inhibitor, VCCI › CrmD_SECRET 0.78 69.0 6.99e-01 100.0% 95.6%
4855718 527.1.1.1 ↗ beta sandwiches › Soluble secreted chemokine inhibitor, VCCI › Soluble secreted chemokine inhibitor, VCCI › Soluble secreted chemokine inhibitor, VCCI › Orthopox_35kD 0.69 65.0 6.11e-01 100.0% 94.9%
3727125 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.58 35.0 4.06e-01 86.7% 84.3%
4310932 12.3.1.24 ↗ beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › YidC_periplas 0.57 46.0 4.04e-01 86.7% 91.0%
1851633 316.1.1.22 ↗ a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › NTF-like 0.52 31.0 3.68e-01 89.1% 84.2%
4927404 316.1.1.27 ↗ a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › Polbeta 0.50 31.0 3.59e-01 89.7% 86.1%
4073000 316.1.1.22 ↗ a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › NTF-like 0.50 30.0 3.55e-01 89.1% 87.3%