←Back to structures

YqaJ-like_viral_recombinase

Euk-Vir

Chrysochromulina_ericina_virus

YqaJ-like_viral_recombinase__YP_009173475__Chrysochromulina_ericina_virus__455364

Identity

Accession:
YP_009173475 ↗
Protein ID:
YqaJ-like_viral_recombinase
Kingdom:
euk

Quality

73.3 mean pLDDT

Taxonomy

Bamfordvirae› Nucleocytoviricota› Megaviricetes› Algavirales› Phycodnaviridae› Chrysochromulina_ericina_virus

TaxID: 455364

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 6-100
PDB
D2 medium residues 184-289_363-378
PDB
Domain cluster: rep: MN698246.1__QGZ18180.1__HTVC112P_gp03__00003__D120-243
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF09588.17 best YqaJ 61.9 1.20e-16 77.0% 64.7%
D3 medium residues 290-362
PDB
Domain cluster: representative
CATH (60)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1unnC00 3.30.1490.100 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › DNA polymerase, Y-family, little finger domain 0.67 58.0 5.13e-01 100.0% 84.7%
2mraA00 3.30.1710.10 Alpha Beta › 2-Layer Sandwich › top7, de novo designed protein › top7, de novo designed protein 0.67 48.0 4.15e-01 76.7% 85.5%
2rrnA01 3.30.70.2040 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.67 48.0 4.65e-01 76.7% 100.0%
3mfiA04 3.30.1490.100 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › DNA polymerase, Y-family, little finger domain 0.66 57.0 4.95e-01 100.0% 93.3%
2ipiA02 3.40.462.20 Alpha Beta › 3-Layer(aba) Sandwich › Vanillyl-alcohol Oxidase; Chain A, domain 3 › 0.66 46.0 3.22e-01 74.0% 40.7%
8bvoA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.64 48.0 4.62e-01 95.9% 69.8%
2jvfA00 3.30.1710.10 Alpha Beta › 2-Layer Sandwich › top7, de novo designed protein › top7, de novo designed protein 0.64 44.0 4.12e-01 72.6% 57.4%
1vwxS02 3.10.20.10 Alpha Beta › Roll › Ubiquitin-like (UB roll) › 0.64 44.0 4.43e-01 72.6% 80.3%
4u7cB04 3.30.1490.100 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › DNA polymerase, Y-family, little finger domain 0.64 55.0 4.92e-01 100.0% 90.8%
6julA02 3.30.1490.100 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › DNA polymerase, Y-family, little finger domain 0.63 54.0 4.99e-01 98.6% 75.0%
3kf3A02 2.60.120.560 Mainly Beta › Sandwich › Jelly Rolls › Exo-inulinase; domain 1 0.62 53.0 4.06e-01 97.3% 85.9%
4kyzA00 3.30.70.600 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S10 0.61 51.0 4.08e-01 100.0% 65.9%
1zvfB01 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.61 49.0 3.81e-01 89.0% 45.7%
4d0qA00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.61 53.0 4.17e-01 100.0% 71.4%
5uaoC00 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.60 53.0 3.21e-01 100.0% 54.9%
4rudA00 2.10.60.10 Mainly Beta › Ribbon › CD59 › CD59 0.60 32.0 3.56e-01 100.0% 62.1%
2v5yA03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.60 53.0 4.86e-01 100.0% 83.2%
3h20A01 3.30.1490.240 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › RepB DNA-primase, N-terminal domain 0.59 42.0 4.41e-01 97.3% 86.4%
2e3vA00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.59 52.0 4.66e-01 100.0% 77.7%
4lizA00 3.40.20.10 Alpha Beta › 3-Layer(aba) Sandwich › Severin › Severin 0.59 41.0 3.40e-01 89.0% 39.1%
1nepA00 2.60.40.770 Mainly Beta › Sandwich › Immunoglobulin-like › 0.59 50.0 4.26e-01 100.0% 82.3%
4d8mA02 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.58 51.0 3.94e-01 100.0% 96.5%
2dbjA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.58 51.0 4.50e-01 100.0% 78.0%
6j7cA01 3.10.310.10 Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › Diaminopimelate Epimerase; Chain A, domain 1 0.58 47.0 3.55e-01 86.3% 92.8%
7bjkA02 3.55.40.20 Alpha Beta › 3-Layer(bab) Sandwich › minor pseudopilin epsh fold › Iron/manganese superoxide dismutase, C-terminal domain 0.58 45.0 3.93e-01 84.9% 92.0%
2re9A01 2.60.120.40 Mainly Beta › Sandwich › Jelly Rolls › 0.58 49.0 3.88e-01 97.3% 75.2%
7y8sB01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.57 50.0 4.77e-01 100.0% 90.8%
6rpxA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.57 50.0 4.82e-01 100.0% 90.6%
3egrA00 3.10.20.520 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phenylacetic acid degradation B 0.57 38.0 4.06e-01 71.2% 87.3%
2atpD00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.57 50.0 4.37e-01 100.0% 86.6%
3f8uB02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.56 48.0 4.12e-01 100.0% 89.7%
3ihlB00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.56 38.0 2.75e-01 71.2% 83.0%
2jxtA01 3.10.20.10 Alpha Beta › Roll › Ubiquitin-like (UB roll) › 0.56 39.0 3.86e-01 72.6% 75.0%
3webA00 2.60.40.770 Mainly Beta › Sandwich › Immunoglobulin-like › 0.56 47.0 4.03e-01 100.0% 84.1%
2eddA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.56 48.0 4.27e-01 100.0% 69.6%
4msvA01 2.60.120.40 Mainly Beta › Sandwich › Jelly Rolls › 0.56 49.0 4.01e-01 100.0% 75.9%
1tnrA00 2.60.120.40 Mainly Beta › Sandwich › Jelly Rolls › 0.55 47.0 3.84e-01 97.3% 77.8%
3nziA01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.55 39.0 3.56e-01 76.7% 58.5%
2avxA00 3.30.450.80 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Transcription factor LuxR-like, autoinducer-binding domain 0.55 41.0 3.28e-01 84.9% 48.5%
1lvbA01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.55 43.0 3.80e-01 98.6% 57.4%
7u7nA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.55 48.0 4.40e-01 100.0% 89.7%
2yn3B03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.54 39.0 3.99e-01 100.0% 78.9%
3r8qA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.54 46.0 4.33e-01 100.0% 83.3%
4h3wA02 2.60.120.1260 Mainly Beta › Sandwich › Jelly Rolls › 0.53 45.0 3.67e-01 100.0% 71.7%
4ca1B02 2.60.210.10 Mainly Beta › Sandwich › Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A › Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 0.53 45.0 3.85e-01 100.0% 90.9%
3qt2B03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.53 46.0 4.25e-01 100.0% 83.7%
1g13A00 2.70.220.10 Mainly Beta › Distorted Sandwich › Ganglioside M2 Activator Protein; Chain: A, › Ganglioside GM2 activator 0.53 45.0 3.58e-01 98.6% 89.5%
3ddcB00 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.53 46.0 3.81e-01 98.6% 70.7%
2o6cA00 2.60.40.2480 Mainly Beta › Sandwich › Immunoglobulin-like › Periplasmic metal-binding protein Tp34-type 0.53 43.0 3.55e-01 98.6% 83.5%
3e1uA00 3.40.140.10 Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Cytidine Deaminase, domain 2 0.53 41.0 3.19e-01 89.0% 57.6%
2i44B00 3.60.40.10 Alpha Beta › 4-Layer Sandwich › Phosphatase 2c; domain 1 › PPM-type phosphatase domain 0.52 43.0 2.97e-01 100.0% 98.1%
2q0oA01 3.30.450.80 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Transcription factor LuxR-like, autoinducer-binding domain 0.52 39.0 3.11e-01 83.6% 49.4%
4n0rA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.52 38.0 3.65e-01 93.2% 67.1%
3nd1A02 3.30.950.10 Alpha Beta › 2-Layer Sandwich › Methyltransferase, Cobalt-precorrin-4 Transmethylase; Domain 2 › Tetrapyrrole methylase, C-terminal domain 0.52 43.0 3.88e-01 98.6% 78.2%
2npnA02 3.30.950.10 Alpha Beta › 2-Layer Sandwich › Methyltransferase, Cobalt-precorrin-4 Transmethylase; Domain 2 › Tetrapyrrole methylase, C-terminal domain 0.51 43.0 3.90e-01 100.0% 78.0%
3qt2A01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.51 44.0 4.09e-01 100.0% 81.4%
4ccjA01 2.60.120.650 Mainly Beta › Sandwich › Jelly Rolls › Cupin 0.51 38.0 2.74e-01 97.3% 24.8%
4do8A00 2.10.60.10 Mainly Beta › Ribbon › CD59 › CD59 0.51 35.0 3.72e-01 74.0% 95.5%
4iuhA00 3.30.450.40 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain 0.50 40.0 3.31e-01 90.4% 57.3%
2pn5A08 2.60.120.1540 Mainly Beta › Sandwich › Jelly Rolls › 0.50 43.0 3.83e-01 100.0% 84.7%
ECOD (77)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3483062 221.1.1.116 ↗ a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › Ubiquitin_6 0.71 64.0 5.40e-01 100.0% 92.5%
3760441 224.1.1.2 ↗ a+b three layers › Gelsolin-like › Gelsolin-like › Gelsolin-like › Gelsolin 0.70 46.0 3.90e-01 83.6% 40.8%
5064795 264.2.1.1 ↗ beta barrels › LigT-like › Prokaryotic type I DNA topoisomerase beta-barrel domain › Prokaryotic type I DNA topoisomerase beta-barrel domain › Topoisom_bac 0.70 53.0 4.43e-01 79.5% 99.2%
5051952 264.2.1.0 ↗ beta barrels › LigT-like › Prokaryotic type I DNA topoisomerase beta-barrel domain › Prokaryotic type I DNA topoisomerase beta-barrel domain 0.70 48.0 4.16e-01 71.2% 100.0%
4292753 264.2.1.0 ↗ beta barrels › LigT-like › Prokaryotic type I DNA topoisomerase beta-barrel domain › Prokaryotic type I DNA topoisomerase beta-barrel domain 0.69 51.0 4.69e-01 78.1% 100.0%
4043865 304.28.1.0 ↗ a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain 0.69 49.0 4.73e-01 75.3% 100.0%
4490981 302.1.1.1 ↗ a+b two layers › Reverse ferredoxin › Lesion bypass DNA polymerase (Y-family), little finger domain › Lesion bypass DNA polymerase (Y-family), little finger domain › IMS_C 0.69 59.0 5.26e-01 100.0% 84.5%
3905094 302.1.1.1 ↗ a+b two layers › Reverse ferredoxin › Lesion bypass DNA polymerase (Y-family), little finger domain › Lesion bypass DNA polymerase (Y-family), little finger domain › IMS_C 0.69 60.0 4.97e-01 100.0% 81.5%
5014007 3115.2.1.0 ↗ a+b two layers › GP2-like › GP2 › GP2 0.68 46.0 5.08e-01 72.6% 92.7%
4647537 302.1.1.1 ↗ a+b two layers › Reverse ferredoxin › Lesion bypass DNA polymerase (Y-family), little finger domain › Lesion bypass DNA polymerase (Y-family), little finger domain › IMS_C 0.68 58.0 5.20e-01 100.0% 82.7%
4260704 224.1.1.2 ↗ a+b three layers › Gelsolin-like › Gelsolin-like › Gelsolin-like › Gelsolin 0.67 40.0 3.70e-01 80.8% 45.3%
4265395 302.1.1.1 ↗ a+b two layers › Reverse ferredoxin › Lesion bypass DNA polymerase (Y-family), little finger domain › Lesion bypass DNA polymerase (Y-family), little finger domain › IMS_C 0.66 57.0 4.97e-01 100.0% 83.5%
4300924 302.1.1.1 ↗ a+b two layers › Reverse ferredoxin › Lesion bypass DNA polymerase (Y-family), little finger domain › Lesion bypass DNA polymerase (Y-family), little finger domain › IMS_C 0.66 56.0 4.96e-01 100.0% 80.9%
3411558 302.1.1.1 ↗ a+b two layers › Reverse ferredoxin › Lesion bypass DNA polymerase (Y-family), little finger domain › Lesion bypass DNA polymerase (Y-family), little finger domain › IMS_C 0.65 56.0 4.62e-01 100.0% 80.7%
3822570 304.3.1.1 ↗ a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain › HMA 0.65 44.0 4.34e-01 71.2% 97.5%
3435000 10.32.1.8 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › CBM_4_9 0.64 57.0 4.31e-01 98.6% 72.4%
5074648 3115.1.1.0 ↗ a+b two layers › GP2-like › RplX-like › RplX-like 0.64 43.0 4.35e-01 71.2% 74.7%
4983311 2003.1.2.29 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › NAD_binding_8 0.63 56.0 3.52e-01 100.0% 57.2%
3686562 4121.1.1.0 ↗ a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like 0.63 44.0 2.81e-01 74.0% 50.0%
3994984 3115.1.1.0 ↗ a+b two layers › GP2-like › RplX-like › RplX-like 0.62 44.0 4.64e-01 74.0% 93.8%
5000510 3115.1.1.1 ↗ a+b two layers › GP2-like › RplX-like › RplX-like › Ribosomal_L18A 0.62 42.0 4.23e-01 71.2% 73.3%
3585568 10.4.1.1 ↗ beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain › CUB 0.62 55.0 4.20e-01 100.0% 75.3%
4013514 3115.1.1.0 ↗ a+b two layers › GP2-like › RplX-like › RplX-like 0.61 41.0 3.73e-01 71.2% 53.3%
3882078 11.2.1.1 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 0.61 52.0 4.32e-01 97.3% 69.6%
4027866 11.2.1.1 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 0.61 52.0 3.98e-01 95.9% 44.1%
3657071 109.4.1.2208 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, DYW_deaminase, Eplus_motif, E_motif, TPR_24 0.60 49.0 3.07e-01 89.0% 45.2%
3420651 109.4.1.1521 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, DYW_deaminase, Eplus_motif, E_motif 0.60 48.0 3.17e-01 89.0% 55.3%
3444049 109.4.1.1285 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, DYW_deaminase, Eplus_motif, E_motif 0.60 48.0 2.90e-01 89.0% 33.9%
5051674 11.1.1.471 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Kre9_KNH 0.60 53.0 4.90e-01 100.0% 86.3%
3607549 11.2.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain 0.60 51.0 3.63e-01 95.9% 54.7%
3891055 304.163.1.2 ↗ a+b two layers › Alpha-beta plaits › ATP-binding protein TM_1403 insertion domain › ATP-binding protein TM_1403 insertion domain › ACT_13 0.60 44.0 4.09e-01 80.8% 93.7%
4967222 3115.1.1.1 ↗ a+b two layers › GP2-like › RplX-like › RplX-like › Ribosomal_L18A 0.59 40.0 4.30e-01 71.2% 93.3%
3346510 109.4.1.1291 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, PPR_3, DYW_deaminase, E_motif 0.59 48.0 2.85e-01 90.4% 31.0%
3619736 10.4.1.1 ↗ beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain › CUB 0.59 52.0 4.37e-01 100.0% 80.0%
3804919 207.1.1.37 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › C-JID 0.59 50.0 3.64e-01 98.6% 45.3%
3343923 109.4.1.1156 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › E_motif 0.59 46.0 3.14e-01 89.0% 61.8%
4465843 382.1.1.0 ↗ few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like 0.58 39.0 3.75e-01 71.2% 64.4%
3378740 109.4.1.1291 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, PPR_3, DYW_deaminase, E_motif 0.58 48.0 2.70e-01 93.2% 34.0%
3488019 221.1.1.6 ↗ a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › RA 0.58 50.0 4.04e-01 98.6% 72.9%
3396683 382.1.1.0 ↗ few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like 0.58 40.0 3.96e-01 74.0% 100.0%
3600134 221.1.1.0 ↗ a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like 0.57 49.0 4.51e-01 100.0% 93.0%
3916585 11.1.1.2 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 0.57 50.0 3.86e-01 100.0% 46.5%
3231215 10.4.1.1 ↗ beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain › CUB 0.57 49.0 4.21e-01 100.0% 84.8%
4000011 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.57 43.0 3.79e-01 79.5% 75.2%
3390562 382.1.1.0 ↗ few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like 0.57 39.0 4.00e-01 71.2% 77.1%
3722266 221.1.1.0 ↗ a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like 0.56 50.0 4.20e-01 100.0% 92.8%
3929801 221.1.1.6 ↗ a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › RA 0.56 47.0 4.41e-01 97.3% 96.8%
3486913 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.56 48.0 4.07e-01 97.3% 87.2%
3704468 221.1.1.0 ↗ a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like 0.55 47.0 4.21e-01 98.6% 93.6%
3593642 221.1.1.0 ↗ a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like 0.55 47.0 4.42e-01 100.0% 92.6%
3583600 382.1.1.0 ↗ few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like 0.55 40.0 3.92e-01 78.1% 98.8%
4025617 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.55 48.0 3.78e-01 100.0% 85.6%
4146398 223.1.1.7 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › Autoind_bind 0.55 43.0 3.33e-01 86.3% 50.0%
3831780 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.55 41.0 3.63e-01 80.8% 57.0%
3623120 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.55 46.0 3.70e-01 94.5% 70.0%
3218957 221.1.1.6 ↗ a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › RA 0.55 46.0 4.08e-01 100.0% 77.4%
3914464 11.1.1.562 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › BTBD16_C 0.55 48.0 3.90e-01 100.0% 87.9%
3620456 221.1.1.64 ↗ a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › Formin_GBD_N 0.54 46.0 4.12e-01 98.6% 93.6%
5051305 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.54 43.0 3.61e-01 86.3% 52.8%
3795522 11.1.1.9 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Arrestin_N 0.54 47.0 3.90e-01 100.0% 82.2%
3553704 382.1.1.1 ↗ few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like › UPAR_LY6 0.54 38.0 3.59e-01 74.0% 70.0%
4434717 206.1.3.15 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › Lant_dehydr_N 0.54 46.0 2.82e-01 100.0% 52.4%
3927031 382.1.1.0 ↗ few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like 0.53 39.0 3.52e-01 79.5% 93.3%
4967498 3110.1.1.0 ↗ a/b three-layered sandwiches › STT3/PglB/AglB core domain › STT3/PglB/AglB core domain › STT3/PglB/AglB core domain 0.53 45.0 3.14e-01 100.0% 37.1%
3414005 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.53 44.0 3.66e-01 97.3% 57.9%
3928420 3680.1.1.0 ↗ a+b complex topology › Zinc finger FYVE domain-containing protein 9 C-terminal domain › Zinc finger FYVE domain-containing protein 9 C-terminal domain › Zinc finger FYVE domain-containing protein 9 C-terminal domain 0.52 45.0 3.62e-01 98.6% 98.0%
3427946 109.4.1.1521 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, DYW_deaminase, Eplus_motif, E_motif 0.52 36.0 2.14e-01 71.2% 23.4%
3312666 221.1.1.0 ↗ a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like 0.52 40.0 4.05e-01 95.9% 90.0%
3802249 109.4.1.1291 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, PPR_3, DYW_deaminase, E_motif 0.52 42.0 2.61e-01 95.9% 58.5%
3622256 219.1.1.3 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH 0.52 40.0 3.21e-01 86.3% 90.3%
5011866 210.1.3.3 ↗ a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_4 0.52 43.0 3.16e-01 100.0% 37.0%
4946875 862.1.1.1 ↗ a+b complex topology › Prim-pol domain › Prim-pol domain › Prim-pol domain › DNA_primase_S 0.51 44.0 3.04e-01 97.3% 27.5%
3446121 109.4.1.3478 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_1, PPR_2, DYW_deaminase, Eplus_motif, E_motif, TPR_24 0.51 37.0 2.20e-01 78.1% 17.1%
3830691 109.4.1.2337 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, PPR_3, DYW_deaminase, E_motif, TPR_24 0.51 42.0 2.60e-01 97.3% 58.7%
3180837 1.1.5.30 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Pyridox_oxase_2 0.51 41.0 2.96e-01 95.9% 38.4%
3679857 109.4.1.2337 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, PPR_3, DYW_deaminase, E_motif, TPR_24 0.51 42.0 2.77e-01 97.3% 85.7%
5006272 10.1.2.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.50 42.0 3.34e-01 97.3% 67.9%