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Zinc-finger_domain_containing_protein

Euk-Vir

Pandoravirus_quercus

Zinc-finger_domain_containing_protein__YP_009483797__Pandoravirus_quercus__2107709

Identity

Accession:
YP_009483797 ↗
Protein ID:
Zinc-finger_domain_containing_protein
Kingdom:
euk

Quality

74.3 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 87-149
PDB
Domain cluster: representative
CATH (4)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
5xbfA02 1.20.80.10 Mainly Alpha › Up-down Bundle › Acyl-CoA Binding Protein › 0.59 49.0 4.30e-01 96.8% 66.7%
4gxzD00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.58 48.0 3.66e-01 98.4% 81.2%
1zkeA00 1.20.58.90 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.56 39.0 3.69e-01 100.0% 59.3%
1g2rA00 3.30.1230.10 Alpha Beta › 2-Layer Sandwich › Hypothetical Cytosolic Protein; Chain: A; › YlxR-like 0.51 43.0 3.86e-01 100.0% 74.5%
ECOD (68)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3894364 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.94 72.0 7.72e-01 81.0% 92.7%
3907900 101.43.1.0 ↗ alpha arrays › HTH › Phage G20C small terminase N-terminal domain › Phage G20C small terminase N-terminal domain 0.93 75.0 7.73e-01 85.7% 90.0%
3891361 4202.1.1.0 ↗ alpha duplicates or obligate multimers › Hermes dimerisation domain › Hermes dimerisation domain › Hermes dimerisation domain 0.92 75.0 7.70e-01 85.7% 90.0%
3934751 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.91 77.0 7.86e-01 88.9% 96.7%
3245635 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.90 73.0 7.77e-01 85.7% 100.0%
3891808 2484.1.1.282 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Dimer_Tnp_hAT, PF27041 0.90 82.0 4.70e-01 96.8% 98.8%
3467280 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.89 80.0 4.58e-01 96.8% 99.8%
3459942 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.88 81.0 4.74e-01 98.4% 24.1%
3436723 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.88 77.0 7.95e-01 93.7% 98.3%
3893091 2484.1.1.0 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.88 82.0 4.75e-01 100.0% 99.6%
3369321 101.1.10.0 ↗ alpha arrays › HTH › HTH › Cyclin-like 0.88 76.0 7.79e-01 93.7% 96.7%
3648289 2484.1.1.0 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.87 81.0 4.65e-01 100.0% 97.7%
3413200 2484.1.1.0 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.87 74.0 4.37e-01 90.5% 98.9%
3301688 2484.1.1.0 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.87 78.0 4.54e-01 96.8% 97.8%
3908854 2484.1.1.215 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › PF27041 0.87 80.0 4.65e-01 98.4% 99.6%
3664107 192.18.1.0 ↗ alpha bundles › Long alpha-hairpin › MxiH-like › MxiH-like 0.87 81.0 4.42e-01 100.0% 58.8%
3360123 192.18.1.0 ↗ alpha bundles › Long alpha-hairpin › MxiH-like › MxiH-like 0.87 78.0 4.50e-01 96.8% 99.4%
3463169 2484.1.1.0 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.87 77.0 4.45e-01 96.8% 99.8%
3214480 2484.1.1.0 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.86 80.0 4.63e-01 100.0% 97.8%
3661620 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.86 75.0 7.48e-01 93.7% 92.3%
3355033 4202.1.1.0 ↗ alpha duplicates or obligate multimers › Hermes dimerisation domain › Hermes dimerisation domain › Hermes dimerisation domain 0.86 74.0 7.61e-01 92.1% 96.7%
3462608 2484.1.1.0 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.86 80.0 4.58e-01 100.0% 99.4%
3351860 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.86 75.0 7.23e-01 93.7% 87.1%
3338071 2484.1.1.215 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › PF27041 0.86 78.0 5.61e-01 98.4% 63.6%
3618865 192.15.1.0 ↗ alpha bundles › Long alpha-hairpin › Endosomal sorting complex assembly domains › Endosomal sorting complex assembly domains 0.86 77.0 6.58e-01 100.0% 65.0%
3677854 2484.1.1.0 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.86 79.0 4.53e-01 100.0% 99.3%
3306744 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.86 78.0 4.47e-01 98.4% 99.6%
3914552 192.18.1.0 ↗ alpha bundles › Long alpha-hairpin › MxiH-like › MxiH-like 0.86 79.0 4.56e-01 100.0% 99.6%
3996954 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.85 74.0 7.35e-01 93.7% 92.3%
3420880 2484.1.1.0 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.85 71.0 4.12e-01 88.9% 99.6%
3681567 2484.1.1.0 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.85 77.0 4.45e-01 98.4% 99.4%
3920627 192.18.1.0 ↗ alpha bundles › Long alpha-hairpin › MxiH-like › MxiH-like 0.85 79.0 4.55e-01 100.0% 100.0%
3442809 101.1.11.0 ↗ alpha arrays › HTH › HTH › Ribbon-helix-helix 0.85 74.0 7.17e-01 93.7% 87.1%
3805242 192.18.1.0 ↗ alpha bundles › Long alpha-hairpin › MxiH-like › MxiH-like 0.85 76.0 4.37e-01 96.8% 94.6%
3577543 101.1.10.0 ↗ alpha arrays › HTH › HTH › Cyclin-like 0.85 75.0 7.24e-01 95.2% 87.1%
3832907 192.18.1.0 ↗ alpha bundles › Long alpha-hairpin › MxiH-like › MxiH-like 0.85 78.0 4.49e-01 100.0% 98.9%
3347629 101.1.10.0 ↗ alpha arrays › HTH › HTH › Cyclin-like 0.84 73.0 7.53e-01 93.7% 98.3%
3453242 192.18.1.0 ↗ alpha bundles › Long alpha-hairpin › MxiH-like › MxiH-like 0.84 78.0 4.48e-01 100.0% 99.2%
3458166 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.84 68.0 7.02e-01 88.9% 95.0%
3669577 4202.1.1.0 ↗ alpha duplicates or obligate multimers › Hermes dimerisation domain › Hermes dimerisation domain › Hermes dimerisation domain 0.84 75.0 7.43e-01 95.2% 93.8%
3437776 2484.1.1.0 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.84 76.0 4.39e-01 98.4% 99.4%
3909751 101.1.3.0 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like 0.84 69.0 6.70e-01 88.9% 82.9%
3317835 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.83 76.0 7.36e-01 98.4% 91.4%
3517882 2484.1.1.215 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › PF27041 0.83 76.0 4.49e-01 98.4% 23.5%
3314239 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.83 72.0 7.43e-01 93.7% 100.0%
None — 0.83 76.0 4.51e-01 98.4% 25.6%
3307229 2484.1.1.0 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.83 67.0 3.92e-01 87.3% 100.0%
3441637 2484.1.1.165 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.83 76.0 4.39e-01 100.0% 95.3%
3335943 2484.1.1.165 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.82 74.0 4.31e-01 100.0% 98.2%
3799851 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.82 62.0 6.55e-01 82.5% 92.7%
3376926 192.18.1.0 ↗ alpha bundles › Long alpha-hairpin › MxiH-like › MxiH-like 0.81 74.0 4.25e-01 100.0% 99.3%
3680415 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.81 73.0 6.89e-01 98.4% 85.3%
3799692 2484.1.1.50 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Dimer_Tnp_hAT 0.81 74.0 4.27e-01 100.0% 98.0%
3381332 192.18.1.0 ↗ alpha bundles › Long alpha-hairpin › MxiH-like › MxiH-like 0.81 74.0 4.40e-01 100.0% 24.2%
3823072 2484.1.1.165 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.81 73.0 4.24e-01 100.0% 96.8%
3332271 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.79 71.0 6.73e-01 100.0% 88.0%
3412961 2484.1.1.0 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.79 68.0 4.10e-01 96.8% 100.0%
3220601 2484.1.1.0 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.79 71.0 4.16e-01 100.0% 25.7%
None — 0.78 64.0 3.86e-01 88.9% 24.2%
3421242 2484.1.1.0 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.75 64.0 3.77e-01 96.8% 99.8%
3683603 2484.1.1.0 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.73 62.0 3.70e-01 96.8% 99.2%
3247714 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.72 55.0 5.82e-01 84.1% 98.2%
4993593 198.1.1.27 ↗ alpha arrays › Saposin-like › Saposin-like › Saposin-like › PF27234 0.63 50.0 4.70e-01 90.5% 85.0%
3216960 109.4.1.496 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Sec5 0.62 48.0 2.81e-01 85.7% 15.6%
3237605 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.62 53.0 4.43e-01 100.0% 82.6%
3696367 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.60 51.0 4.89e-01 100.0% 90.7%
3607327 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.53 39.0 3.99e-01 82.5% 93.3%
3691898 109.4.1.330 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › BIG2_C 0.52 37.0 2.60e-01 79.4% 23.7%