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ac52

Euk-Vir

Oxyplax_ochracea_nucleopolyhedrovirus

ac52__YP_009666611__Oxyplax_ochracea_nucleopolyhedrovirus__2083176

Identity

Accession:
YP_009666611 ↗
Protein ID:
ac52
Kingdom:
euk

Quality

75.0 mean pLDDT

Taxonomy

Naldaviricetes› Lefavirales› Baculoviridae› Alphabaculovirus› Oxyplax_ochracea_nucleopolyhedrovirus

TaxID: 2083176

Cluster

View cluster (9 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 99-208
PDB
Domain cluster: rep: hypothetical_protein_AHEV_050__YP_008003873__Adoxophyes_honmai_entomopoxvirus_L__1293540__D1-84
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF11077.15 best DUF2616 78.1 1.10e-21 96.4% 51.7%
CATH (35)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4fvmA06 1.10.287.690 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › B family DNA polymerase, finger domain 0.71 32.0 4.83e-01 98.2% 100.0%
6tkvA01 1.10.287.1060 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like 0.71 40.0 5.01e-01 98.2% 91.2%
1z0jB00 4.10.860.20 Few Secondary Structures › Irregular › DNA Excision Repair, Uvrb; Chain A › Rabenosyn, Rab binding domain 0.70 34.0 4.76e-01 76.4% 98.0%
2a26B01 4.10.860.10 Few Secondary Structures › Irregular › DNA Excision Repair, Uvrb; Chain A › UVR domain 0.70 30.0 4.65e-01 90.0% 100.0%
4aidA02 1.10.10.400 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Polyribonucleotide nucleotidyltransferase, RNA-binding domain 0.69 41.0 4.73e-01 84.5% 80.5%
5mmjn01 1.10.287.1480 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.69 34.0 3.73e-01 91.8% 57.3%
4l0rB00 1.20.58.90 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.63 36.0 4.24e-01 99.1% 82.2%
2d9dA00 1.20.58.120 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › BAG domain 0.62 42.0 4.56e-01 91.8% 84.3%
4htpB00 1.10.3260.10 Mainly Alpha › Orthogonal Bundle › DNA ligase i, domain 1 › DNA ligase, ATP-dependent, N-terminal domain 0.62 46.0 3.67e-01 77.3% 97.3%
4adnA01 1.20.1280.250 Mainly Alpha › Up-down Bundle › Monooxygenase › 0.60 43.0 4.77e-01 94.5% 95.3%
1otkA00 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.59 42.0 3.28e-01 73.6% 99.2%
5dikA00 1.20.1290.10 Mainly Alpha › Up-down Bundle › AhpD-like › AhpD-like 0.59 36.0 3.67e-01 95.5% 60.7%
1w9cA00 1.25.10.10 Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant 0.58 41.0 3.02e-01 75.5% 45.2%
2l1lB00 1.20.1440.250 Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › 0.56 40.0 3.86e-01 73.6% 75.6%
3a8pA02 6.10.140.680 Special › Helix non-globular › Helix Hairpins › 0.56 43.0 4.32e-01 81.8% 92.1%
1r9dA01 3.20.70.20 Alpha Beta › Alpha-Beta Barrel › Anaerobic Ribonucleotide-triphosphate Reductase Large Chain › 0.56 44.0 2.65e-01 83.6% 92.0%
6hwjA01 3.90.1200.10 Alpha Beta › Alpha-Beta Complex › Aminoglycoside 3'-phosphotransferase; Chain: A, domain 2 › Aminoglycoside phosphotransferase (APH), C-terminal lobe 0.56 49.0 3.75e-01 94.5% 84.6%
5mmjo00 1.10.287.10 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › S15/NS1, RNA-binding 0.56 36.0 4.21e-01 85.5% 96.0%
1io1A01 1.20.1330.10 Mainly Alpha › Up-down Bundle › f41 fragment of flagellin, N-terminal domain › f41 fragment of flagellin, N-terminal domain 0.55 49.0 4.24e-01 97.3% 78.1%
2wzkA01 1.20.1310.10 Mainly Alpha › Up-down Bundle › 5 helical Cullin repeat like › Cullin Repeats 0.55 46.0 4.42e-01 90.9% 96.9%
2ijqA00 1.10.3450.10 Mainly Alpha › Orthogonal Bundle › Hyaluronidase domain-like › TTHA0068-like 0.55 39.0 3.61e-01 97.3% 56.6%
1iq0A03 1.10.730.10 Mainly Alpha › Orthogonal Bundle › Isoleucyl-tRNA Synthetase; Domain 1 › Isoleucyl-tRNA Synthetase; Domain 1 0.55 40.0 3.98e-01 84.5% 73.3%
5z7qA00 1.20.1330.10 Mainly Alpha › Up-down Bundle › f41 fragment of flagellin, N-terminal domain › f41 fragment of flagellin, N-terminal domain 0.55 49.0 4.17e-01 98.2% 78.4%
2qywA00 1.20.58.400 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › t-snare proteins 0.54 41.0 4.40e-01 90.9% 94.7%
6xkyA01 1.20.1330.10 Mainly Alpha › Up-down Bundle › f41 fragment of flagellin, N-terminal domain › f41 fragment of flagellin, N-terminal domain 0.54 47.0 3.99e-01 97.3% 72.7%
3e98B00 3.30.450.40 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain 0.54 45.0 3.85e-01 90.0% 82.8%
4oydB00 1.10.132.20 Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor 0.53 44.0 4.33e-01 89.1% 94.0%
4nx9A01 1.20.1330.10 Mainly Alpha › Up-down Bundle › f41 fragment of flagellin, N-terminal domain › f41 fragment of flagellin, N-terminal domain 0.53 47.0 4.21e-01 98.2% 82.6%
5ziyA01 1.20.1330.10 Mainly Alpha › Up-down Bundle › f41 fragment of flagellin, N-terminal domain › f41 fragment of flagellin, N-terminal domain 0.53 47.0 3.92e-01 99.1% 77.3%
4g10A02 1.20.1050.10 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › 0.53 45.0 4.23e-01 93.6% 80.1%
3caxA01 1.20.120.520 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › nmb1532 protein domain like 0.52 46.0 3.75e-01 100.0% 66.4%
3nz2A00 2.160.10.10 Mainly Beta › 3 Solenoid › UDP N-Acetylglucosamine Acyltransferase; domain 1 › Hexapeptide repeat proteins 0.51 36.0 2.99e-01 70.9% 73.5%
4fb2A00 1.10.630.10 Mainly Alpha › Orthogonal Bundle › Cytochrome p450 › Cytochrome P450 0.51 42.0 2.91e-01 90.0% 60.5%
3ez0C00 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.51 40.0 3.22e-01 83.6% 62.0%
3kyiA00 1.20.120.160 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › HPT domain 0.50 43.0 4.17e-01 99.1% 82.8%
ECOD (49)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3993765 627.1.1.0 ↗ alpha complex topology › VPS9 domain › VPS9 domain › VPS9 domain 0.78 46.0 5.20e-01 85.5% 76.5%
4629067 633.24.1.5 ↗ alpha bundles › Bromodomain-like › RABEX-5 helical domain › RABEX-5 helical domain › PF29080 0.78 49.0 5.60e-01 85.5% 83.5%
4226337 101.11.1.1 ↗ alpha arrays › HTH › Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 › Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 › PNPase 0.74 43.0 5.01e-01 85.5% 80.0%
4116078 101.11.1.1 ↗ alpha arrays › HTH › Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 › Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 › PNPase 0.73 42.0 5.01e-01 85.5% 84.0%
3925681 633.24.1.2 ↗ alpha bundles › Bromodomain-like › RABEX-5 helical domain › RABEX-5 helical domain › DUF5601 0.71 44.0 4.92e-01 83.6% 77.8%
4120292 101.11.1.1 ↗ alpha arrays › HTH › Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 › Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 › PNPase 0.71 41.0 4.79e-01 84.5% 80.0%
4304916 101.11.1.1 ↗ alpha arrays › HTH › Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 › Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 › PNPase 0.70 42.0 4.45e-01 85.5% 66.0%
3607719 633.24.1.0 ↗ alpha bundles › Bromodomain-like › RABEX-5 helical domain › RABEX-5 helical domain 0.68 44.0 4.90e-01 84.5% 83.5%
3589591 601.32.1.1 ↗ alpha bundles › Four-helical up-and-down bundle › FusB family N-terminal domain › FusB family N-terminal domain › EF-G-binding_N 0.66 46.0 5.33e-01 92.7% 100.0%
3216079 633.24.1.2 ↗ alpha bundles › Bromodomain-like › RABEX-5 helical domain › RABEX-5 helical domain › DUF5601 0.66 45.0 5.08e-01 85.5% 90.6%
5070905 109.3.1.476 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Proton_antipo_M 0.65 48.0 3.59e-01 77.3% 60.7%
4023439 604.12.1.0 ↗ alpha bundles › Spectrin repeat-like › MIT domain › MIT domain 0.64 33.0 4.09e-01 95.5% 78.6%
3182484 206.1.1.14 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › ABC1 0.64 52.0 3.39e-01 87.3% 85.5%
4991647 3281.1.1.1 ↗ alpha complex topology › Sodium/proton antiporter subunits-like › Sodium/proton antiporter subunits-like › NADH-quinone oxidoreductase subunit L (NuoL)-related › Proton_antipo_M 0.62 49.0 3.11e-01 84.5% 62.9%
3260930 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.62 45.0 3.39e-01 75.5% 41.8%
3733685 109.21.1.1 ↗ alpha superhelices › Repetitive alpha hairpins › Nucleoporin NUP85/Nucleoporin NUP145 C-terminal domain › Nucleoporin NUP85/Nucleoporin NUP145 C-terminal domain › Nucleopor_Nup85 0.62 53.0 3.17e-01 90.9% 53.0%
3594704 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.62 46.0 3.16e-01 78.2% 59.2%
4992858 3281.1.1.1 ↗ alpha complex topology › Sodium/proton antiporter subunits-like › Sodium/proton antiporter subunits-like › NADH-quinone oxidoreductase subunit L (NuoL)-related › Proton_antipo_M 0.60 51.0 3.27e-01 90.9% 97.0%
4681537 3718.1.1.1 ↗ alpha bundles › Flagellar protein fliT › Flagellar protein fliT › Flagellar protein fliT › FliT 0.59 37.0 3.90e-01 85.5% 69.0%
3386251 7558.1.1.1 ↗ a/b three-layered sandwiches › Glycerol-3-phosphate (1)-acyltransferase › Glycerol-3-phosphate (1)-acyltransferase › Glycerol-3-phosphate (1)-acyltransferase › Acyltransferase 0.59 52.0 4.05e-01 96.4% 81.7%
4034192 603.1.1.11 ↗ alpha bundles › STAT-like › t-snare proteins › t-snare proteins › DUF3169 0.58 43.0 3.57e-01 78.2% 85.0%
3681194 604.1.1.0 ↗ alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat 0.57 40.0 3.90e-01 72.7% 91.2%
4260426 3718.1.1.1 ↗ alpha bundles › Flagellar protein fliT › Flagellar protein fliT › Flagellar protein fliT › FliT 0.57 36.0 3.83e-01 91.8% 71.0%
4998788 3236.1.1.1 ↗ alpha complex topology › Cation-proton antiporter › Cation-proton antiporter (CPA) › Cation-proton antiporter (CPA) › Na_H_Exchanger 0.57 43.0 2.91e-01 78.2% 40.5%
5009328 150.1.1.207 ↗ alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin › DUF2175 0.57 36.0 3.69e-01 100.0% 65.7%
4960309 5058.1.1.101 ↗ alpha bundles › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region › DUF1622 0.56 41.0 4.20e-01 82.7% 78.2%
3273620 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.55 40.0 2.75e-01 78.2% 33.3%
3479094 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.55 49.0 3.80e-01 98.2% 45.7%
3789653 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.55 45.0 3.26e-01 90.9% 62.3%
3612498 5050.1.1.28 ↗ alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › BT1 0.54 46.0 3.30e-01 91.8% 66.9%
4017163 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.54 38.0 3.37e-01 73.6% 81.2%
3909630 601.48.1.0 ↗ alpha bundles › Four-helical up-and-down bundle › vWA2 C-terminal domain › vWA2 C-terminal domain 0.54 35.0 4.06e-01 94.5% 94.7%
4986595 3843.1.1.0 ↗ alpha complex topology › NADH-quinone oxidoreductase subunit K › NADH-quinone oxidoreductase subunit K › NADH-quinone oxidoreductase subunit K 0.54 37.0 3.92e-01 81.8% 81.1%
3840081 192.29.1.0 ↗ alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) 0.54 48.0 4.40e-01 99.1% 89.5%
4026671 603.1.1.0 ↗ alpha bundles › STAT-like › t-snare proteins › t-snare proteins 0.53 41.0 4.05e-01 90.0% 78.3%
3625181 3710.1.1.3 ↗ alpha bundles › Golgi to ER traffic protein 1 cytosolic domain › Golgi to ER traffic protein 1 cytosolic domain › Golgi to ER traffic protein 1 cytosolic domain › Ribophorin_II_C 0.53 31.0 3.24e-01 100.0% 59.0%
3404638 603.1.1.3 ↗ alpha bundles › STAT-like › t-snare proteins › t-snare proteins › V-SNARE 0.53 39.0 4.09e-01 90.9% 85.0%
3498448 604.3.1.0 ↗ alpha bundles › Spectrin repeat-like › BAG domain › BAG domain 0.53 36.0 4.05e-01 88.2% 96.2%
4937528 603.2.1.0 ↗ alpha bundles › STAT-like › STAT › STAT 0.53 44.0 3.74e-01 89.1% 88.0%
3690329 2004.1.1.473 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ResIII, AAA_11 0.52 41.0 2.81e-01 81.8% 37.3%
3438832 109.4.1.1308 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_1, PPR_2, PPR_3, TPR_24 0.52 39.0 2.63e-01 78.2% 20.7%
3724988 2004.1.1.184 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_11 0.52 40.0 2.78e-01 81.8% 36.8%
5048087 601.28.1.0 ↗ alpha bundles › Four-helical up-and-down bundle › VPS28 C-terminal domain-like › VPS28 C-terminal domain-like 0.51 44.0 4.55e-01 100.0% 100.0%
4988730 601.3.1.1 ↗ alpha bundles › Four-helical up-and-down bundle › Histidine-containing phosphotransfer domain, HPT domain › Histidine-containing phosphotransfer domain, HPT domain › Hpt 0.51 42.0 4.09e-01 92.7% 79.2%
3412080 603.2.1.9 ↗ alpha bundles › STAT-like › STAT › STAT › 7tm_6 0.51 43.0 3.04e-01 91.8% 75.4%
3496310 603.1.1.0 ↗ alpha bundles › STAT-like › t-snare proteins › t-snare proteins 0.51 42.0 4.16e-01 90.9% 85.0%
3622690 601.1.1.0 ↗ alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › alpha-catenin/vinculin 0.51 35.0 3.79e-01 91.8% 84.4%
5020418 601.3.1.1 ↗ alpha bundles › Four-helical up-and-down bundle › Histidine-containing phosphotransfer domain, HPT domain › Histidine-containing phosphotransfer domain, HPT domain › Hpt 0.50 44.0 4.09e-01 98.2% 76.4%
3790050 109.4.1.210 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_19 0.50 40.0 2.75e-01 88.2% 29.8%
D2 medium residues 1-42_69-98
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF11077.15 best DUF2616 35.8 1.10e-08 88.9% 44.9%
CATH (19)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
7a0hA01 3.30.1140.60 Alpha Beta › 2-Layer Sandwich › Ribosomal protein S3 C-terminal domain › F-actin capping protein, alpha subunit 0.58 39.0 3.47e-01 84.7% 49.5%
4adnA01 1.20.1280.250 Mainly Alpha › Up-down Bundle › Monooxygenase › 0.55 46.0 4.41e-01 95.8% 83.5%
2vlaA01 1.10.10.2080 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.55 40.0 3.99e-01 91.7% 74.4%
4akrA01 3.30.1140.60 Alpha Beta › 2-Layer Sandwich › Ribosomal protein S3 C-terminal domain › F-actin capping protein, alpha subunit 0.54 42.0 3.72e-01 84.7% 88.7%
2ptfB02 1.20.58.290 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Hypothetical membrane protein ta0354_69_121. 0.54 39.0 4.25e-01 84.7% 96.5%
2af0A02 1.10.167.10 Mainly Alpha › Orthogonal Bundle › Regulator of G-protein Signalling 4; domain 2 › Regulator of G-protein Signalling 4, domain 2 0.54 44.0 4.34e-01 91.7% 90.0%
2y1vA04 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.54 43.0 3.31e-01 91.7% 74.6%
2psmA00 1.20.1250.70 Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › Interleukin-15/Interleukin-21 0.53 45.0 3.85e-01 95.8% 93.2%
3nynA03 1.10.167.10 Mainly Alpha › Orthogonal Bundle › Regulator of G-protein Signalling 4; domain 2 › Regulator of G-protein Signalling 4, domain 2 0.53 44.0 4.25e-01 93.1% 92.6%
3hhwK01 1.10.3570.10 Mainly Alpha › Orthogonal Bundle › Rhabdovirus nucleoprotein-like fold › Rhabdovirus nucleocapsid protein like domain 0.53 44.0 3.28e-01 91.7% 73.8%
2acxA01 1.10.167.10 Mainly Alpha › Orthogonal Bundle › Regulator of G-protein Signalling 4; domain 2 › Regulator of G-protein Signalling 4, domain 2 0.53 44.0 3.22e-01 93.1% 36.6%
8jpdG01 1.10.167.10 Mainly Alpha › Orthogonal Bundle › Regulator of G-protein Signalling 4; domain 2 › Regulator of G-protein Signalling 4, domain 2 0.52 44.0 3.53e-01 94.4% 53.1%
4cybD00 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.52 41.0 3.22e-01 90.3% 84.2%
4u1cA01 4.10.860.10 Few Secondary Structures › Irregular › DNA Excision Repair, Uvrb; Chain A › UVR domain 0.51 35.0 3.82e-01 98.6% 100.0%
4asvA00 1.20.5.420 Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C 0.51 35.0 3.50e-01 98.6% 68.4%
4nx8B00 3.90.190.10 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily 0.51 42.0 2.93e-01 94.4% 85.7%
1m5iA00 1.10.287.450 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin 0.50 38.0 3.45e-01 86.1% 58.1%
1cmzA02 1.10.167.10 Mainly Alpha › Orthogonal Bundle › Regulator of G-protein Signalling 4; domain 2 › Regulator of G-protein Signalling 4, domain 2 0.50 42.0 4.08e-01 94.4% 90.0%
1vcsA00 1.20.58.400 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › t-snare proteins 0.50 39.0 3.53e-01 86.1% 85.3%
ECOD (12)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4123282 109.4.1.3084 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PF27421 0.63 45.0 3.71e-01 76.4% 82.2%
4966102 223.1.1.3 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › GAF 0.63 52.0 3.94e-01 94.4% 91.4%
3882188 219.1.1.121 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › PF29258 0.62 43.0 3.00e-01 75.0% 69.4%
3959009 601.48.1.0 ↗ alpha bundles › Four-helical up-and-down bundle › vWA2 C-terminal domain › vWA2 C-terminal domain 0.61 41.0 4.29e-01 95.8% 76.9%
3484228 4030.1.1.0 ↗ alpha bundles › alpha-helical domain in subunits of heterodimeric actin filament capping protein Capz › alpha-helical domain in subunits of heterodimeric actin filament capping protein Capz › alpha-helical domain in subunits of heterodimeric actin filament capping protein Capz 0.58 39.0 4.33e-01 87.5% 92.7%
3770592 192.15.1.145 ↗ alpha bundles › Long alpha-hairpin › Endosomal sorting complex assembly domains › Endosomal sorting complex assembly domains › Xin 0.55 38.0 3.90e-01 98.6% 74.3%
3209893 109.4.1.1490 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › MOR2-PAG1_C, MOR2-PAG1_mid 0.55 45.0 2.62e-01 91.7% 12.7%
4009656 5048.1.1.2 ↗ alpha complex topology › Aquaporin-like › Aquaporin-like › Aquaporin-like › Form_Nir_trans 0.54 41.0 2.90e-01 86.1% 76.1%
3915680 904.1.1.28 ↗ few secondary structure elements › B-box zinc-binding domain-like › B-box zinc-binding domain › B-box zinc-binding domain › PF27984 0.54 35.0 2.75e-01 97.2% 28.2%
3825138 109.1.1.1 ↗ alpha superhelices › Repetitive alpha hairpins › Glutathione S-transferase (GST)-C › Glutathione S-transferase (GST)-C › GST_C 0.53 46.0 3.78e-01 100.0% 76.3%
3476130 603.1.1.3 ↗ alpha bundles › STAT-like › t-snare proteins › t-snare proteins › V-SNARE 0.52 43.0 3.41e-01 87.5% 62.1%
3456284 633.12.1.12 ↗ alpha bundles › Bromodomain-like › Ta0600-like › Ta0600-like › Complex1_LYR 0.51 40.0 3.89e-01 86.1% 76.2%