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actin_rearrangement_inducing_factor-1
Euk-VirSpodoptera_exempta_nucleopolyhedrovirus
actin_rearrangement_inducing_factor-1__YP_010086449__Spodoptera_exempta_nucleopolyhedrovirus__1242863
Identity
- Accession:
- YP_010086449 ↗
- Protein ID:
- actin_rearrangement_inducing_factor-1
- Kingdom:
- euk
Quality
70.6
mean pLDDT
Taxonomy
Naldaviricetes›
Lefavirales›
Baculoviridae›
Alphabaculovirus›
Spodoptera_exempta_nucleopolyhedrovirus
TaxID: 1242863
Cluster
View cluster (18 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 42-241
Domain cluster:
rep: ARIF-1__YP_009552685__Operophtera_brumata_nucleopolyhedrovirus__1046267__D3-207
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF06770.19 best | Arif-1 | 195.1 | 1.10e-57 | 86.5% | 99.4% |
CATH (25)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2rldA00 | 1.20.1440.60 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › 23S rRNA-intervening sequence | 0.79 | 44.0 | 5.79e-01 | 100.0% | 96.5% |
| 1yo7A00 | 1.20.120.230 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like | 0.76 | 44.0 | 5.64e-01 | 99.5% | 95.8% |
| 1u89A00 | 1.20.120.230 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like | 0.72 | 43.0 | 5.10e-01 | 99.5% | 84.9% |
| 3lmfA00 | 1.20.1270.360 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.70 | 39.0 | 5.08e-01 | 99.5% | 98.2% |
| 4mhlA00 | 1.20.1250.10 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › | 0.66 | 37.0 | 4.09e-01 | 100.0% | 66.5% |
| 1jm6B02 | 1.20.140.20 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Alpha-ketoacid/pyruvate dehydrogenase kinase, N-terminal domain | 0.65 | 43.0 | 4.74e-01 | 99.5% | 82.2% |
| 3nvoB02 | 1.20.58.340 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Magnesium transport protein CorA, transmembrane region | 0.63 | 36.0 | 4.55e-01 | 79.0% | 94.0% |
| 1xzpA02 | 1.20.120.430 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › tRNA modification GTPase MnmE domain 2 | 0.62 | 39.0 | 4.31e-01 | 86.0% | 75.3% |
| 3ay5A02 | 1.20.1410.10 | Mainly Alpha › Up-down Bundle › I/LWEQ domain › I/LWEQ domain | 0.61 | 38.0 | 4.14e-01 | 97.5% | 73.9% |
| 2oerA00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.60 | 30.0 | 3.22e-01 | 73.0% | 53.6% |
| 4nleA01 | 1.20.200.10 | Mainly Alpha › Up-down Bundle › Fumarase C; Chain A, domain 2 › Fumarase/aspartase (Central domain) | 0.59 | 45.0 | 4.12e-01 | 98.5% | 60.9% |
| 1auwA02 | 1.20.200.10 | Mainly Alpha › Up-down Bundle › Fumarase C; Chain A, domain 2 › Fumarase/aspartase (Central domain) | 0.57 | 41.0 | 3.99e-01 | 99.0% | 64.5% |
| 3rkgA02 | 1.20.58.340 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Magnesium transport protein CorA, transmembrane region | 0.57 | 41.0 | 4.45e-01 | 87.0% | 87.8% |
| 4etrB00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.56 | 34.0 | 4.35e-01 | 82.0% | 100.0% |
| 3x29A00 | 1.20.140.150 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › | 0.55 | 44.0 | 4.74e-01 | 100.0% | 99.4% |
| 4k1pE00 | 1.20.1170.10 | Mainly Alpha › Up-down Bundle › Hemolysin E; Chain: A; › | 0.54 | 47.0 | 4.02e-01 | 93.0% | 88.6% |
| 4p79A00 | 1.20.140.150 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › | 0.54 | 46.0 | 4.79e-01 | 100.0% | 99.4% |
| 1uruA01 | 1.20.1270.60 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain | 0.54 | 38.0 | 3.80e-01 | 72.0% | 98.1% |
| 6nplA01 | 1.20.1740.10 | Mainly Alpha › Up-down Bundle › Amino acid/polyamine transporter I › Amino acid/polyamine transporter I | 0.52 | 46.0 | 3.53e-01 | 95.0% | 73.2% |
| 5xnyA02 | 1.20.200.10 | Mainly Alpha › Up-down Bundle › Fumarase C; Chain A, domain 2 › Fumarase/aspartase (Central domain) | 0.52 | 47.0 | 4.41e-01 | 100.0% | 79.5% |
| 7eptR01 | 1.20.1070.10 | Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins | 0.52 | 48.0 | 4.40e-01 | 98.5% | 86.6% |
| 2np9A01 | 1.20.58.1300 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.51 | 28.0 | 3.41e-01 | 78.0% | 79.9% |
| 1yjgA00 | 1.20.120.240 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Lipoprotein, type 6 | 0.51 | 31.0 | 3.51e-01 | 83.5% | 77.1% |
| 1q5nA02 | 1.20.200.10 | Mainly Alpha › Up-down Bundle › Fumarase C; Chain A, domain 2 › Fumarase/aspartase (Central domain) | 0.51 | 45.0 | 4.26e-01 | 100.0% | 79.4% |
| 1yfmA02 | 1.20.200.10 | Mainly Alpha › Up-down Bundle › Fumarase C; Chain A, domain 2 › Fumarase/aspartase (Central domain) | 0.51 | 47.0 | 4.23e-01 | 100.0% | 79.9% |
ECOD (62)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3661 | 633.10.1.1 ↗ | alpha bundles › Bromodomain-like › IVS-encoded protein-like › IVS-encoded protein-like › 23S_rRNA_IVP | 0.79 | 44.0 | 5.81e-01 | 100.0% | 97.3% |
| 3514777 | 174.1.1.0 ↗ | few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain | 0.76 | 47.0 | 5.58e-01 | 100.0% | 88.6% |
| 3704726 | 310.2.1.0 ↗ | a+b two layers › RRF/tRNA synthetase additional domain-like › Ribosome recycling factor, RRF › Ribosome recycling factor, RRF | 0.75 | 42.0 | 4.67e-01 | 93.0% | 66.7% |
| 3540972 | 174.1.1.34 ↗ | few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › FAM70 | 0.74 | 51.0 | 5.88e-01 | 100.0% | 93.3% |
| 3782069 | 633.21.1.0 ↗ | alpha bundles › Bromodomain-like › Uncharacterized protein PA2107 › Uncharacterized protein PA2107 | 0.74 | 50.0 | 5.94e-01 | 100.0% | 100.0% |
| 3688917 | 633.23.1.0 ↗ | alpha bundles › Bromodomain-like › Claudin › Claudin | 0.73 | 44.0 | 5.50e-01 | 97.5% | 95.2% |
| 3880276 | 174.1.1.34 ↗ | few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › FAM70 | 0.73 | 52.0 | 5.41e-01 | 100.0% | 77.3% |
| 4651060 | 633.22.1.0 ↗ | alpha bundles › Bromodomain-like › Vitamin K epoxide reductase (VKOR) › Vitamin K epoxide reductase (VKOR) | 0.73 | 48.0 | 5.20e-01 | 99.5% | 78.8% |
| 5004497 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.73 | 35.0 | 2.56e-01 | 91.0% | 18.2% |
| 3483197 | 174.1.1.0 ↗ | few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain | 0.72 | 51.0 | 5.85e-01 | 100.0% | 96.7% |
| 3870615 | 633.23.1.34 ↗ | alpha bundles › Bromodomain-like › Claudin › Claudin › CD20 | 0.72 | 45.0 | 5.57e-01 | 98.5% | 100.0% |
| 3515526 | 174.1.1.0 ↗ | few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain | 0.71 | 47.0 | 5.65e-01 | 99.5% | 98.5% |
| 3901124 | 174.1.1.12 ↗ | few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › BCLP | 0.71 | 51.0 | 5.84e-01 | 97.5% | 97.3% |
| 3585004 | 174.1.1.0 ↗ | few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain | 0.71 | 46.0 | 5.62e-01 | 99.5% | 100.0% |
| 3806764 | 150.1.1.0 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin | 0.70 | 46.0 | 4.61e-01 | 98.0% | 64.5% |
| 3208120 | 633.23.1.22 ↗ | alpha bundles › Bromodomain-like › Claudin › Claudin › MARVEL | 0.69 | 51.0 | 5.69e-01 | 100.0% | 96.8% |
| 3241396 | 174.1.1.0 ↗ | few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain | 0.69 | 52.0 | 5.79e-01 | 97.5% | 98.7% |
| 3633938 | 633.23.1.22 ↗ | alpha bundles › Bromodomain-like › Claudin › Claudin › MARVEL | 0.69 | 48.0 | 5.45e-01 | 99.5% | 93.3% |
| 3937142 | 601.54.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › low CO2-inducible protein LCI1 › low CO2-inducible protein LCI1 | 0.69 | 53.0 | 5.74e-01 | 100.0% | 93.5% |
| 3757832 | 603.1.1.70 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins › EPS8_2nd | 0.68 | 33.0 | 3.88e-01 | 75.0% | 65.5% |
| 4017168 | 150.1.1.114 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin › PF30036 | 0.67 | 47.0 | 5.28e-01 | 97.5% | 92.2% |
| 3939240 | 174.1.1.0 ↗ | few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain | 0.67 | 44.0 | 5.22e-01 | 99.5% | 95.0% |
| 3214392 | 633.21.1.0 ↗ | alpha bundles › Bromodomain-like › Uncharacterized protein PA2107 › Uncharacterized protein PA2107 | 0.67 | 51.0 | 5.61e-01 | 100.0% | 96.4% |
| 3227635 | 150.1.1.0 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin | 0.67 | 50.0 | 5.58e-01 | 100.0% | 96.9% |
| 3249439 | 174.1.1.0 ↗ | few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain | 0.67 | 47.0 | 5.20e-01 | 100.0% | 90.0% |
| 4980828 | 633.23.1.0 ↗ | alpha bundles › Bromodomain-like › Claudin › Claudin | 0.67 | 48.0 | 5.29e-01 | 100.0% | 89.7% |
| 3735230 | 633.23.1.0 ↗ | alpha bundles › Bromodomain-like › Claudin › Claudin | 0.65 | 46.0 | 5.15e-01 | 100.0% | 91.6% |
| 3880919 | 633.23.1.0 ↗ | alpha bundles › Bromodomain-like › Claudin › Claudin | 0.65 | 44.0 | 5.05e-01 | 99.0% | 93.2% |
| 3793454 | 150.1.1.0 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin | 0.65 | 51.0 | 5.45e-01 | 100.0% | 93.7% |
| 3621307 | 601.54.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › low CO2-inducible protein LCI1 › low CO2-inducible protein LCI1 | 0.65 | 51.0 | 5.56e-01 | 100.0% | 99.4% |
| 3758651 | 633.23.1.34 ↗ | alpha bundles › Bromodomain-like › Claudin › Claudin › CD20 | 0.64 | 55.0 | 5.69e-01 | 100.0% | 96.3% |
| 3831865 | 633.4.1.1 ↗ | alpha bundles › Bromodomain-like › Plant invertase/pectin methylesterase inhibitor › Plant invertase/pectin methylesterase inhibitor › PMEI | 0.64 | 42.0 | 5.05e-01 | 98.0% | 100.0% |
| 3601384 | 633.23.1.0 ↗ | alpha bundles › Bromodomain-like › Claudin › Claudin | 0.63 | 50.0 | 5.41e-01 | 100.0% | 100.0% |
| 3174758 | 633.23.1.0 ↗ | alpha bundles › Bromodomain-like › Claudin › Claudin | 0.62 | 46.0 | 4.78e-01 | 100.0% | 81.1% |
| 3789005 | 150.1.1.114 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin › PF30036 | 0.61 | 50.0 | 5.31e-01 | 100.0% | 98.3% |
| 3682306 | 633.23.1.32 ↗ | alpha bundles › Bromodomain-like › Claudin › Claudin › CASP_dom | 0.61 | 48.0 | 5.20e-01 | 97.5% | 98.2% |
| 4525096 | 633.4.1.1 ↗ | alpha bundles › Bromodomain-like › Plant invertase/pectin methylesterase inhibitor › Plant invertase/pectin methylesterase inhibitor › PMEI | 0.60 | 46.0 | 5.00e-01 | 100.0% | 95.2% |
| 4001280 | 633.21.1.0 ↗ | alpha bundles › Bromodomain-like › Uncharacterized protein PA2107 › Uncharacterized protein PA2107 | 0.60 | 44.0 | 4.91e-01 | 98.0% | 96.1% |
| 4150398 | 633.23.1.32 ↗ | alpha bundles › Bromodomain-like › Claudin › Claudin › CASP_dom | 0.60 | 46.0 | 5.10e-01 | 99.5% | 100.0% |
| 3616822 | 633.21.1.0 ↗ | alpha bundles › Bromodomain-like › Uncharacterized protein PA2107 › Uncharacterized protein PA2107 | 0.59 | 45.0 | 4.99e-01 | 98.0% | 99.4% |
| 3629503 | 109.3.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat | 0.58 | 34.0 | 3.26e-01 | 80.0% | 48.1% |
| 3717837 | 633.23.1.23 ↗ | alpha bundles › Bromodomain-like › Claudin › Claudin › Amastin | 0.58 | 50.0 | 5.19e-01 | 99.5% | 97.3% |
| 3701133 | 633.23.1.0 ↗ | alpha bundles › Bromodomain-like › Claudin › Claudin | 0.58 | 49.0 | 4.99e-01 | 99.5% | 89.9% |
| 3728487 | 174.1.1.0 ↗ | few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain | 0.58 | 49.0 | 5.07e-01 | 99.5% | 93.7% |
| 3641299 | 633.4.1.1 ↗ | alpha bundles › Bromodomain-like › Plant invertase/pectin methylesterase inhibitor › Plant invertase/pectin methylesterase inhibitor › PMEI | 0.57 | 46.0 | 4.74e-01 | 100.0% | 91.4% |
| 3213535 | 5001.1.1.54 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7TM_GPCR_Srbc | 0.56 | 52.0 | 4.52e-01 | 97.0% | 84.8% |
| 3404874 | 633.23.1.0 ↗ | alpha bundles › Bromodomain-like › Claudin › Claudin | 0.56 | 51.0 | 5.10e-01 | 99.5% | 95.2% |
| 3389671 | 633.23.1.0 ↗ | alpha bundles › Bromodomain-like › Claudin › Claudin | 0.56 | 49.0 | 5.01e-01 | 97.5% | 97.9% |
| 4011320 | 633.23.1.0 ↗ | alpha bundles › Bromodomain-like › Claudin › Claudin | 0.55 | 52.0 | 5.03e-01 | 100.0% | 93.2% |
| 3864859 | 633.23.1.4 ↗ | alpha bundles › Bromodomain-like › Claudin › Claudin › Claudin_2 | 0.55 | 51.0 | 5.09e-01 | 100.0% | 95.7% |
| 3527277 | 633.23.1.1 ↗ | alpha bundles › Bromodomain-like › Claudin › Claudin › PMP22_Claudin | 0.54 | 46.0 | 4.66e-01 | 99.5% | 92.8% |
| 3470322 | 633.23.1.4 ↗ | alpha bundles › Bromodomain-like › Claudin › Claudin › Claudin_2 | 0.54 | 47.0 | 4.70e-01 | 99.5% | 90.2% |
| 4001618 | 633.23.1.14 ↗ | alpha bundles › Bromodomain-like › Claudin › Claudin › Claudin_3 | 0.53 | 47.0 | 4.83e-01 | 99.5% | 99.0% |
| 3886244 | 633.23.1.1 ↗ | alpha bundles › Bromodomain-like › Claudin › Claudin › PMP22_Claudin | 0.53 | 46.0 | 4.66e-01 | 99.5% | 94.0% |
| 3183865 | 109.4.1.681 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Fungal_trans_2 | 0.53 | 40.0 | 3.21e-01 | 93.5% | 40.3% |
| 3626593 | 633.23.1.5 ↗ | alpha bundles › Bromodomain-like › Claudin › Claudin › Clc-like | 0.53 | 48.0 | 4.71e-01 | 100.0% | 92.7% |
| 3489607 | 633.23.1.4 ↗ | alpha bundles › Bromodomain-like › Claudin › Claudin › Claudin_2 | 0.52 | 48.0 | 4.74e-01 | 100.0% | 94.9% |
| 3250807 | 633.23.1.0 ↗ | alpha bundles › Bromodomain-like › Claudin › Claudin | 0.52 | 48.0 | 4.82e-01 | 99.5% | 100.0% |
| 3310914 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.52 | 42.0 | 4.17e-01 | 95.0% | 80.0% |
| 3725391 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.51 | 36.0 | 2.78e-01 | 91.5% | 32.0% |
| 3848155 | 633.23.1.1 ↗ | alpha bundles › Bromodomain-like › Claudin › Claudin › PMP22_Claudin | 0.51 | 46.0 | 4.57e-01 | 100.0% | 93.8% |
| 4057653 | 4177.1.1.0 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like | 0.51 | 38.0 | 3.43e-01 | 77.0% | 97.8% |