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alkaline_exonuclease
Euk-VirPhascolarctid_gammaherpesvirus_1
alkaline_exonuclease__YP_010087482__Phascolarctid_gammaherpesvirus_1__2249313
Identity
- Accession:
- YP_010087482 ↗
- Protein ID:
- alkaline_exonuclease
- Kingdom:
- euk
Quality
84.3
mean pLDDT
Taxonomy
Heunggongvirae›
Peploviricota›
Herviviricetes›
Herpesvirales›
Orthoherpesviridae›
Manticavirus›
Phascolarctid_gammaherpesvirus_1
TaxID: 2249313
Cluster
View cluster (70 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 16-51_67-108_220-265
Domain cluster:
rep: ORF42__YP_009042019__Bovine_gammaherpesvirus_6__1504288__D34-146
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF01677.23 best | Herpes_UL7 | 47.4 | 2.40e-12 | 75.8% | 37.6% |
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1b3qB03 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.53 | 25.0 | 3.31e-01 | 82.3% | 80.9% |
| 4jpbW01 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.53 | 27.0 | 3.48e-01 | 85.5% | 93.4% |
| 1ny8A00 | 3.30.300.90 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › BolA-like | 0.50 | 32.0 | 3.52e-01 | 95.2% | 80.4% |
| 1u5kA01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.50 | 24.0 | 2.81e-01 | 95.2% | 62.2% |