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alkylated_DNA_repair_protein
Euk-VirPithovirus_sibericum
alkylated_DNA_repair_protein__YP_009001063__Pithovirus_sibericum__1450746
Identity
- Accession:
- YP_009001063 ↗
- Protein ID:
- alkylated_DNA_repair_protein
- Kingdom:
- euk
Quality
81.5
mean pLDDT
Taxonomy
Bamfordvirae›
Nucleocytoviricota›
Megaviricetes›
Pimascovirales›
Pithoviridae›
Alphapithovirus›
Pithovirus_sibericum
TaxID: 1450746
Cluster
View cluster (250 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-45_102-196
Domain cluster:
rep: hypothetical_protein_EhV348__YP_294106__Emiliania_huxleyi_virus_86__181082__D1-31_113-210
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF13532.13 best | 2OG-FeII_Oxy_2 | 48.4 | 1.90e-12 | 88.6% | 49.0% |
CATH (56)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3btxA00 | 2.60.120.590 | Mainly Beta › Sandwich › Jelly Rolls › Alpha-ketoglutarate-dependent dioxygenase AlkB-like | 0.89 | 85.0 | 7.26e-01 | 98.6% | 100.0% |
| 2iuwA00 | 2.60.120.590 | Mainly Beta › Sandwich › Jelly Rolls › Alpha-ketoglutarate-dependent dioxygenase AlkB-like | 0.88 | 83.0 | 7.10e-01 | 97.9% | 96.6% |
| 2fd8A01 | 2.60.120.590 | Mainly Beta › Sandwich › Jelly Rolls › Alpha-ketoglutarate-dependent dioxygenase AlkB-like | 0.82 | 74.0 | 6.42e-01 | 94.3% | 100.0% |
| 4ie5A01 | 2.60.120.590 | Mainly Beta › Sandwich › Jelly Rolls › Alpha-ketoglutarate-dependent dioxygenase AlkB-like | 0.81 | 74.0 | 5.87e-01 | 96.4% | 95.1% |
| 4qkbA00 | 2.60.120.590 | Mainly Beta › Sandwich › Jelly Rolls › Alpha-ketoglutarate-dependent dioxygenase AlkB-like | 0.81 | 73.0 | 6.54e-01 | 95.7% | 99.5% |
| 7vjvA01 | 2.60.120.590 | Mainly Beta › Sandwich › Jelly Rolls › Alpha-ketoglutarate-dependent dioxygenase AlkB-like | 0.80 | 73.0 | 6.32e-01 | 96.4% | 95.7% |
| 8h68A01 | 2.60.120.590 | Mainly Beta › Sandwich › Jelly Rolls › Alpha-ketoglutarate-dependent dioxygenase AlkB-like | 0.80 | 72.0 | 6.09e-01 | 95.0% | 88.2% |
| 4nhxA01 | 2.60.120.620 | Mainly Beta › Sandwich › Jelly Rolls › q2cbj1_9rhob like domain | 0.79 | 74.0 | 6.21e-01 | 99.3% | 95.5% |
| 5yl6A01 | 2.60.120.590 | Mainly Beta › Sandwich › Jelly Rolls › Alpha-ketoglutarate-dependent dioxygenase AlkB-like | 0.79 | 70.0 | 6.40e-01 | 92.9% | 97.7% |
| 4nplA00 | 2.60.120.590 | Mainly Beta › Sandwich › Jelly Rolls › Alpha-ketoglutarate-dependent dioxygenase AlkB-like | 0.78 | 70.0 | 5.94e-01 | 94.3% | 92.5% |
| 3kt7A01 | 2.60.120.620 | Mainly Beta › Sandwich › Jelly Rolls › q2cbj1_9rhob like domain | 0.77 | 73.0 | 5.91e-01 | 100.0% | 93.1% |
| 2g19A00 | 2.60.120.620 | Mainly Beta › Sandwich › Jelly Rolls › q2cbj1_9rhob like domain | 0.75 | 70.0 | 5.97e-01 | 100.0% | 98.6% |
| 3pl0B00 | 2.60.120.620 | Mainly Beta › Sandwich › Jelly Rolls › q2cbj1_9rhob like domain | 0.71 | 66.0 | 5.36e-01 | 99.3% | 95.2% |
| 4nhxA02 | 2.60.120.620 | Mainly Beta › Sandwich › Jelly Rolls › q2cbj1_9rhob like domain | 0.71 | 66.0 | 5.50e-01 | 99.3% | 88.9% |
| 6kwaA01 | 2.60.120.330 | Mainly Beta › Sandwich › Jelly Rolls › B-lactam Antibiotic, Isopenicillin N Synthase; Chain | 0.71 | 65.0 | 5.25e-01 | 98.6% | 95.7% |
| 2vpvA00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.69 | 43.0 | 5.20e-01 | 72.1% | 93.6% |
| 7ekdA01 | 2.60.120.330 | Mainly Beta › Sandwich › Jelly Rolls › B-lactam Antibiotic, Isopenicillin N Synthase; Chain | 0.68 | 63.0 | 4.73e-01 | 100.0% | 77.8% |
| 3cewA01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.68 | 45.0 | 5.10e-01 | 74.3% | 86.4% |
| 3thpA02 | 2.60.120.1520 | Mainly Beta › Sandwich › Jelly Rolls › | 0.68 | 55.0 | 5.38e-01 | 84.3% | 85.5% |
| 4yrdA02 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.68 | 50.0 | 5.40e-01 | 75.7% | 90.8% |
| 1v70A00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.67 | 47.0 | 5.40e-01 | 80.0% | 96.2% |
| 7zvmA01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.67 | 45.0 | 5.28e-01 | 72.1% | 95.1% |
| 5lz6A00 | 2.60.120.680 | Mainly Beta › Sandwich › Jelly Rolls › GOLD domain | 0.67 | 55.0 | 5.83e-01 | 91.4% | 99.2% |
| 4mv2A00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.66 | 49.0 | 5.28e-01 | 75.7% | 90.0% |
| 3bb6C00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.66 | 47.0 | 5.18e-01 | 87.9% | 90.2% |
| 1j3qB00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.66 | 51.0 | 4.66e-01 | 80.7% | 80.9% |
| 4o9gA00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.66 | 53.0 | 5.35e-01 | 95.0% | 84.8% |
| 2bnmA02 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.65 | 47.0 | 5.03e-01 | 73.6% | 93.3% |
| 1sfnA00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.65 | 59.0 | 4.81e-01 | 96.4% | 95.5% |
| 5j7mA00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.65 | 48.0 | 5.17e-01 | 76.4% | 88.5% |
| 5tpvB00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.65 | 51.0 | 5.16e-01 | 94.3% | 83.3% |
| 1o4tA00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.65 | 47.0 | 5.21e-01 | 75.7% | 97.4% |
| 4hslA01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.64 | 47.0 | 4.43e-01 | 82.1% | 63.9% |
| 3fcgB00 | 2.60.40.3110 | Mainly Beta › Sandwich › Immunoglobulin-like › Outer membrane usher protein | 0.64 | 26.0 | 3.57e-01 | 84.3% | 73.2% |
| 6b9tF01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.63 | 46.0 | 4.82e-01 | 75.0% | 96.8% |
| 2pytA00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.62 | 45.0 | 4.71e-01 | 77.9% | 82.0% |
| 4qglA00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.61 | 55.0 | 5.13e-01 | 97.9% | 85.1% |
| 2waoA01 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.61 | 42.0 | 4.63e-01 | 74.3% | 88.3% |
| 1sq4A01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.61 | 53.0 | 5.27e-01 | 100.0% | 89.6% |
| 5by5A00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.60 | 45.0 | 4.91e-01 | 77.1% | 93.9% |
| 4devD01 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.60 | 42.0 | 4.43e-01 | 72.1% | 82.4% |
| 3jqwC00 | 2.60.120.380 | Mainly Beta › Sandwich › Jelly Rolls › | 0.59 | 42.0 | 4.48e-01 | 72.9% | 95.9% |
| 4qjvB00 | 3.30.1360.10 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › RNA polymerase, RBP11-like subunit | 0.59 | 27.0 | 3.26e-01 | 77.9% | 64.9% |
| 4qjvA01 | 3.30.1360.10 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › RNA polymerase, RBP11-like subunit | 0.59 | 25.0 | 3.10e-01 | 79.3% | 62.9% |
| 2xvlA02 | 2.60.120.380 | Mainly Beta › Sandwich › Jelly Rolls › | 0.57 | 41.0 | 4.12e-01 | 75.7% | 71.4% |
| 2qnkA00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.57 | 50.0 | 3.92e-01 | 95.0% | 98.6% |
| 6tfjA01 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.56 | 40.0 | 4.28e-01 | 77.1% | 87.8% |
| 1tg7A05 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.56 | 42.0 | 3.93e-01 | 77.9% | 72.2% |
| 6f90A01 | 2.70.98.10 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › | 0.56 | 40.0 | 3.24e-01 | 73.6% | 50.9% |
| 2wvxA01 | 2.70.98.10 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › | 0.55 | 39.0 | 3.10e-01 | 73.6% | 65.2% |
| 2o14A01 | 2.60.120.430 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding lectin | 0.54 | 40.0 | 4.02e-01 | 77.9% | 91.9% |
| 1wkyA02 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.54 | 38.0 | 3.85e-01 | 73.6% | 81.9% |
| 3cihA01 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.53 | 38.0 | 3.67e-01 | 73.6% | 69.0% |
| 3lb9A00 | 2.60.120.180 | Mainly Beta › Sandwich › Jelly Rolls › Glycoside hydrolase family 11/12, catalytic domain | 0.53 | 37.0 | 3.48e-01 | 72.9% | 90.7% |
| 1opoA02 | 2.60.40.1780 | Mainly Beta › Sandwich › Immunoglobulin-like › Carmovirus coat protein | 0.53 | 36.0 | 4.11e-01 | 72.9% | 95.1% |
| 4jklA01 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.51 | 40.0 | 3.76e-01 | 85.0% | 98.9% |
ECOD (64)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3644051 | 10.12.1.51 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › 2OG-FeII_Oxy_2 | 0.90 | 85.0 | 6.96e-01 | 97.9% | 100.0% |
| 3889037 | 10.12.1.51 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › 2OG-FeII_Oxy_2 | 0.89 | 84.0 | 7.04e-01 | 97.9% | 94.1% |
| 4616368 | 10.12.1.51 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › 2OG-FeII_Oxy_2 | 0.89 | 85.0 | 7.10e-01 | 100.0% | 94.1% |
| 3720765 | 10.12.1.51 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › 2OG-FeII_Oxy_2 | 0.88 | 84.0 | 6.52e-01 | 100.0% | 85.8% |
| 3954494 | 10.12.1.51 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › 2OG-FeII_Oxy_2 | 0.87 | 82.0 | 7.25e-01 | 98.6% | 98.4% |
| 3598513 | 10.12.1.51 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › 2OG-FeII_Oxy_2 | 0.85 | 80.0 | 6.69e-01 | 98.6% | 92.4% |
| 3612604 | 10.12.1.0 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix | 0.84 | 79.0 | 6.43e-01 | 98.6% | 89.6% |
| 3606808 | 10.12.1.0 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix | 0.82 | 78.0 | 5.90e-01 | 100.0% | 77.5% |
| 3807732 | 10.12.1.51 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › 2OG-FeII_Oxy_2 | 0.82 | 77.0 | 5.68e-01 | 99.3% | 82.4% |
| 3626911 | 10.12.1.51 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › 2OG-FeII_Oxy_2 | 0.82 | 74.0 | 6.34e-01 | 95.0% | 90.0% |
| 3703166 | 10.12.1.51 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › 2OG-FeII_Oxy_2 | 0.82 | 77.0 | 6.02e-01 | 100.0% | 96.7% |
| 3275735 | 10.12.1.51 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › 2OG-FeII_Oxy_2 | 0.82 | 77.0 | 5.70e-01 | 100.0% | 74.8% |
| 381239 | 10.12.1.51 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › 2OG-FeII_Oxy_2 | 0.82 | 77.0 | 6.57e-01 | 98.6% | 99.0% |
| 3591800 | 10.12.1.51 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › 2OG-FeII_Oxy_2 | 0.81 | 77.0 | 5.72e-01 | 100.0% | 74.8% |
| 3716546 | 10.12.1.0 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix | 0.81 | 77.0 | 6.30e-01 | 100.0% | 90.0% |
| 4448396 | 10.12.1.51 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › 2OG-FeII_Oxy_2 | 0.81 | 77.0 | 6.50e-01 | 100.0% | 95.0% |
| 3503271 | 10.12.1.51 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › 2OG-FeII_Oxy_2 | 0.81 | 73.0 | 6.37e-01 | 94.3% | 90.5% |
| 3803552 | 10.12.1.51 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › 2OG-FeII_Oxy_2 | 0.81 | 76.0 | 6.19e-01 | 98.6% | 95.8% |
| 2582284 | 10.12.1.51 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › 2OG-FeII_Oxy_2 | 0.81 | 77.0 | 5.60e-01 | 100.0% | 79.1% |
| 3928888 | 10.12.1.51 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › 2OG-FeII_Oxy_2 | 0.81 | 76.0 | 5.88e-01 | 99.3% | 78.6% |
| 3227842 | 10.12.1.51 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › 2OG-FeII_Oxy_2 | 0.81 | 77.0 | 5.85e-01 | 100.0% | 81.0% |
| 3293763 | 10.12.1.51 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › 2OG-FeII_Oxy_2 | 0.81 | 70.0 | 6.21e-01 | 90.0% | 91.6% |
| 3552729 | 10.12.1.51 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › 2OG-FeII_Oxy_2 | 0.81 | 74.0 | 6.45e-01 | 96.4% | 99.0% |
| 3512542 | 10.12.1.51 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › 2OG-FeII_Oxy_2 | 0.81 | 76.0 | 5.89e-01 | 99.3% | 79.6% |
| 3410684 | 10.12.1.51 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › 2OG-FeII_Oxy_2 | 0.81 | 76.0 | 5.62e-01 | 100.0% | 81.8% |
| 3625985 | 10.12.1.51 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › 2OG-FeII_Oxy_2 | 0.80 | 75.0 | 5.67e-01 | 97.9% | 72.3% |
| 3591207 | 10.12.1.0 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix | 0.80 | 74.0 | 5.85e-01 | 97.1% | 96.2% |
| 3742680 | 10.12.1.51 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › 2OG-FeII_Oxy_2 | 0.80 | 75.0 | 5.80e-01 | 99.3% | 86.6% |
| 4026114 | 10.12.1.0 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix | 0.80 | 73.0 | 6.24e-01 | 96.4% | 89.3% |
| 3625509 | 10.12.1.0 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix | 0.80 | 75.0 | 5.76e-01 | 97.9% | 82.5% |
| 2814988 | 10.12.1.51 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › 2OG-FeII_Oxy_2 | 0.80 | 76.0 | 6.52e-01 | 99.3% | 91.2% |
| 3714955 | 10.12.1.0 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix | 0.80 | 74.0 | 5.64e-01 | 97.1% | 75.2% |
| 3868505 | 10.12.1.51 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › 2OG-FeII_Oxy_2 | 0.79 | 72.0 | 5.90e-01 | 95.7% | 86.3% |
| 3648087 | 10.12.1.53 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › 2OG-FeII_Oxy_3 | 0.79 | 74.0 | 6.35e-01 | 98.6% | 98.1% |
| 3354165 | 10.12.1.0 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix | 0.79 | 74.0 | 6.25e-01 | 98.6% | 95.9% |
| 3519454 | 10.12.1.0 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix | 0.79 | 73.0 | 5.75e-01 | 97.1% | 81.9% |
| 3391336 | 10.12.1.54 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › 2OG-FeII_Oxy_4 | 0.79 | 74.0 | 6.09e-01 | 99.3% | 94.5% |
| 3737318 | 10.12.1.51 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › 2OG-FeII_Oxy_2 | 0.79 | 72.0 | 6.38e-01 | 95.7% | 93.2% |
| 3847135 | 10.12.1.53 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › 2OG-FeII_Oxy_3 | 0.79 | 74.0 | 5.83e-01 | 100.0% | 84.8% |
| 3887707 | 10.12.1.53 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › 2OG-FeII_Oxy_3 | 0.78 | 74.0 | 5.76e-01 | 100.0% | 82.4% |
| 3597906 | 10.12.1.0 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix | 0.78 | 72.0 | 5.84e-01 | 97.1% | 87.3% |
| 3194044 | 10.12.1.79 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › DUF4246 | 0.77 | 72.0 | 5.15e-01 | 100.0% | 68.3% |
| 3573526 | 10.12.1.51 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › 2OG-FeII_Oxy_2 | 0.76 | 66.0 | 5.83e-01 | 90.7% | 90.3% |
| 4881598 | 10.12.1.43 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › 2OG-Fe_Oxy_2 | 0.73 | 67.0 | 5.58e-01 | 97.1% | 95.1% |
| 3488931 | 10.12.1.44 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Ofd1_CTDD | 0.73 | 67.0 | 5.40e-01 | 98.6% | 91.7% |
| 3626991 | 10.12.1.44 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Ofd1_CTDD | 0.72 | 67.0 | 5.36e-01 | 99.3% | 88.8% |
| 3820432 | 10.12.1.17 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › 2OG-FeII_Oxy,DIOX_N | 0.71 | 66.0 | 5.04e-01 | 100.0% | 82.9% |
| 3923391 | 10.12.1.44 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Ofd1_CTDD | 0.71 | 65.0 | 5.39e-01 | 99.3% | 89.2% |
| 3496981 | 10.12.1.0 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix | 0.69 | 64.0 | 5.29e-01 | 99.3% | 85.8% |
| 3645910 | 10.12.1.51 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › 2OG-FeII_Oxy_2 | 0.69 | 56.0 | 5.27e-01 | 83.6% | 85.4% |
| 3395760 | 10.12.1.0 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix | 0.69 | 63.0 | 5.06e-01 | 98.6% | 76.6% |
| 3544069 | 10.4.1.28 ↗ | beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain › PF27640 | 0.67 | 47.0 | 5.02e-01 | 72.1% | 97.6% |
| 4164755 | 10.12.1.39 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_2 | 0.66 | 50.0 | 4.40e-01 | 77.9% | 64.1% |
| 4969555 | 10.12.1.100 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Polysacc_synt_C | 0.65 | 54.0 | 5.33e-01 | 97.1% | 83.4% |
| 3244708 | 10.4.1.27 ↗ | beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain › PF29839 | 0.63 | 44.0 | 4.66e-01 | 82.9% | 82.5% |
| 3213179 | 10.4.1.27 ↗ | beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain › PF29839 | 0.63 | 44.0 | 4.61e-01 | 83.6% | 78.9% |
| 3924594 | 10.32.1.4 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › EMP24_GP25L | 0.62 | 41.0 | 4.81e-01 | 73.6% | 98.9% |
| 3713297 | 10.32.1.4 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › EMP24_GP25L | 0.62 | 43.0 | 4.79e-01 | 74.3% | 93.3% |
| 3788140 | 10.32.1.4 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › EMP24_GP25L | 0.61 | 43.0 | 4.26e-01 | 72.9% | 69.7% |
| 401494 | 10.32.1.19 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › PPC | 0.59 | 42.0 | 4.48e-01 | 72.9% | 95.9% |
| 4950864 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.59 | 41.0 | 4.57e-01 | 71.4% | 98.2% |
| 3341432 | 10.32.1.4 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › EMP24_GP25L | 0.59 | 43.0 | 4.25e-01 | 75.0% | 84.1% |
| 5067639 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.58 | 40.0 | 4.23e-01 | 71.4% | 97.6% |
| 3228364 | 2006.1.6.33 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA_4 | 0.53 | 48.0 | 3.44e-01 | 100.0% | 72.6% |
D2
medium
residues 46-101
Domain cluster:
representative
CATH (10)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3btxA00 | 2.60.120.590 | Mainly Beta › Sandwich › Jelly Rolls › Alpha-ketoglutarate-dependent dioxygenase AlkB-like | 0.85 | 78.0 | 5.17e-01 | 100.0% | 29.4% |
| 4ie5A01 | 2.60.120.590 | Mainly Beta › Sandwich › Jelly Rolls › Alpha-ketoglutarate-dependent dioxygenase AlkB-like | 0.84 | 76.0 | 4.78e-01 | 100.0% | 36.4% |
| 2iuwA00 | 2.60.120.590 | Mainly Beta › Sandwich › Jelly Rolls › Alpha-ketoglutarate-dependent dioxygenase AlkB-like | 0.74 | 67.0 | 4.48e-01 | 100.0% | 28.8% |
| 4hv0C00 | 1.10.1220.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant › Met repressor-like | 0.62 | 44.0 | 3.78e-01 | 73.2% | 89.9% |
| 1o22A00 | 3.90.1000.10 | Alpha Beta › Alpha-Beta Complex › Orphan Protein Tm0875; Chain: A; › Hypothetical protein TM0875 | 0.58 | 35.0 | 2.59e-01 | 75.0% | 22.8% |
| 7tfmA01 | 1.10.1780.10 | Mainly Alpha › Orthogonal Bundle › Double Clp-N motif › Clp, N-terminal domain | 0.58 | 43.0 | 3.22e-01 | 78.6% | 75.4% |
| 1rjgA00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.54 | 40.0 | 2.63e-01 | 83.9% | 35.4% |
| 6j7xA01 | 1.25.40.120 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Protein prenylyltransferase | 0.54 | 41.0 | 2.66e-01 | 83.9% | 28.4% |
| 1kaeA03 | 1.20.5.1300 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.51 | 38.0 | 3.83e-01 | 94.6% | 83.6% |
| 1bjaA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.50 | 36.0 | 3.14e-01 | 80.4% | 83.2% |
ECOD (7)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3644051 | 10.12.1.51 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › 2OG-FeII_Oxy_2 | 0.85 | 77.0 | 4.98e-01 | 100.0% | 33.5% |
| 3889037 | 10.12.1.51 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › 2OG-FeII_Oxy_2 | 0.83 | 76.0 | 4.94e-01 | 100.0% | 26.4% |
| 3329627 | 101.1.11.0 ↗ | alpha arrays › HTH › HTH › Ribbon-helix-helix | 0.56 | 38.0 | 3.38e-01 | 85.7% | 48.2% |
| 3936883 | 7534.1.1.0 ↗ | a/b three-layered sandwiches › Undecaprenyl diphosphate synthase › Undecaprenyl diphosphate synthase › Undecaprenyl diphosphate synthase | 0.55 | 37.0 | 2.69e-01 | 71.4% | 61.2% |
| 5022577 | 304.51.1.7 ↗ | a+b two layers › Alpha-beta plaits › CRISPR transcript (pre-crRNA) processing endoribonuclease-related › CRISPR transcript (pre-crRNA) processing endoribonuclease-related › CRISPR_Cas6 | 0.54 | 37.0 | 2.80e-01 | 73.2% | 82.9% |
| 3799570 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.52 | 40.0 | 2.99e-01 | 83.9% | 80.7% |
| 3482194 | 376.1.1.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4 | 0.52 | 41.0 | 3.10e-01 | 89.3% | 64.0% |