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amazon_plume_scaffold_4_prodigal-single.1__X__X__00133
Bact-Viramazon_plume_scaffold_4_prodigal-single.1__X__X__00133
Identity
- Kingdom:
- phage
Quality
85.5
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 229-417
Domain cluster:
rep: aot2015-NO08_SRR1761682_USA_scaffold_2_curated_prodigal-single.1__X__X__00112__D438-482_516-700
CATH (68)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4wfqA00 | 3.40.50.410 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › von Willebrand factor, type A domain | 0.82 | 76.0 | 7.56e-01 | 100.0% | 94.8% |
| 3fcsB03 | 3.40.50.410 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › von Willebrand factor, type A domain | 0.80 | 76.0 | 6.90e-01 | 100.0% | 97.1% |
| 3gxbA00 | 3.40.50.410 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › von Willebrand factor, type A domain | 0.79 | 70.0 | 7.25e-01 | 100.0% | 97.7% |
| 1m2vB04 | 3.40.50.410 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › von Willebrand factor, type A domain | 0.79 | 75.0 | 6.90e-01 | 100.0% | 97.9% |
| 1shuX00 | 3.40.50.410 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › von Willebrand factor, type A domain | 0.79 | 68.0 | 6.98e-01 | 100.0% | 94.5% |
| 2iueA00 | 3.40.50.410 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › von Willebrand factor, type A domain | 0.79 | 75.0 | 7.22e-01 | 100.0% | 95.3% |
| 7xlqD02 | 3.40.50.410 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › von Willebrand factor, type A domain | 0.79 | 70.0 | 7.04e-01 | 100.0% | 92.6% |
| 4fx5A02 | 3.40.50.410 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › von Willebrand factor, type A domain | 0.78 | 70.0 | 7.14e-01 | 100.0% | 96.2% |
| 4cn8A02 | 3.40.50.410 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › von Willebrand factor, type A domain | 0.78 | 69.0 | 6.95e-01 | 100.0% | 92.1% |
| 4igiA00 | 3.40.50.410 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › von Willebrand factor, type A domain | 0.78 | 69.0 | 6.83e-01 | 100.0% | 88.8% |
| 5y58A01 | 3.40.50.410 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › von Willebrand factor, type A domain | 0.78 | 73.0 | 6.90e-01 | 100.0% | 100.0% |
| 1bho100 | 3.40.50.410 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › von Willebrand factor, type A domain | 0.78 | 72.0 | 7.27e-01 | 100.0% | 97.4% |
| 6snkA01 | 3.40.50.410 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › von Willebrand factor, type A domain | 0.77 | 70.0 | 7.12e-01 | 100.0% | 97.3% |
| 3snkA00 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.77 | 46.0 | 5.76e-01 | 100.0% | 95.0% |
| 1lfaA00 | 3.40.50.410 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › von Willebrand factor, type A domain | 0.76 | 68.0 | 6.99e-01 | 100.0% | 96.7% |
| 2nutA03 | 3.40.50.410 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › von Willebrand factor, type A domain | 0.76 | 72.0 | 6.41e-01 | 100.0% | 95.7% |
| 7zs9401 | 3.40.50.410 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › von Willebrand factor, type A domain | 0.76 | 72.0 | 6.75e-01 | 100.0% | 100.0% |
| 1efaA02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.75 | 44.0 | 5.29e-01 | 100.0% | 85.7% |
| 1ab5A00 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.71 | 44.0 | 5.29e-01 | 100.0% | 92.0% |
| 5tqjA00 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.69 | 42.0 | 5.08e-01 | 100.0% | 91.1% |
| 1eucB03 | 3.40.50.261 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Succinyl-CoA synthetase domains | 0.69 | 46.0 | 5.16e-01 | 100.0% | 86.3% |
| 1q0pA00 | 3.40.50.410 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › von Willebrand factor, type A domain | 0.69 | 65.0 | 6.54e-01 | 100.0% | 99.5% |
| 2kpoA00 | 3.40.50.11230 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.68 | 37.0 | 4.62e-01 | 100.0% | 88.2% |
| 5enzA02 | 3.40.50.2000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; | 0.66 | 45.0 | 4.88e-01 | 100.0% | 81.4% |
| 3gdwB00 | 3.40.50.510 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Phosphotransferase system, mannose-type IIA component | 0.65 | 37.0 | 4.25e-01 | 100.0% | 75.4% |
| 2gt1A02 | 3.40.50.2000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; | 0.65 | 47.0 | 5.05e-01 | 100.0% | 86.9% |
| 2mr5A00 | 3.40.50.11230 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.64 | 43.0 | 4.91e-01 | 100.0% | 93.4% |
| 3dmyA03 | 3.40.50.261 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Succinyl-CoA synthetase domains | 0.63 | 50.0 | 5.39e-01 | 99.5% | 95.7% |
| 2l82A00 | 3.40.50.11230 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.63 | 48.0 | 5.10e-01 | 100.0% | 91.4% |
| 2csuA03 | 3.40.50.261 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Succinyl-CoA synthetase domains | 0.62 | 48.0 | 5.14e-01 | 100.0% | 91.6% |
| 4gmgA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.62 | 45.0 | 4.43e-01 | 100.0% | 68.5% |
| 2hszA01 | 3.40.50.1000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like | 0.61 | 46.0 | 5.06e-01 | 100.0% | 96.7% |
| 3kzxA01 | 3.40.50.1000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like | 0.61 | 42.0 | 4.85e-01 | 100.0% | 96.4% |
| 2vy9A00 | 3.30.750.24 | Alpha Beta › 2-Layer Sandwich › Transcription Regulator spoIIAA › STAS domain | 0.61 | 35.0 | 4.32e-01 | 100.0% | 92.1% |
| 1yt8A01 | 3.40.250.10 | Alpha Beta › 3-Layer(aba) Sandwich › Oxidized Rhodanese; domain 1 › Rhodanese-like domain | 0.61 | 30.0 | 4.02e-01 | 97.9% | 89.7% |
| 2nyvA01 | 3.40.50.1000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like | 0.60 | 44.0 | 4.81e-01 | 100.0% | 93.4% |
| 3vpaB00 | 3.40.50.1440 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Tubulin/FtsZ, GTPase domain | 0.60 | 44.0 | 3.89e-01 | 100.0% | 51.4% |
| 2ziuB01 | 3.40.50.10130 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.58 | 40.0 | 4.42e-01 | 100.0% | 88.6% |
| 5hvmA02 | 3.40.50.2000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; | 0.57 | 46.0 | 4.51e-01 | 100.0% | 77.9% |
| 5jioA02 | 3.40.50.2000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; | 0.56 | 46.0 | 4.44e-01 | 100.0% | 77.0% |
| 3e8mA00 | 3.40.50.1000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like | 0.56 | 43.0 | 4.57e-01 | 100.0% | 91.5% |
| 1u9yA02 | 3.40.50.2020 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.56 | 37.0 | 4.36e-01 | 88.4% | 100.0% |
| 6oz7B00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.56 | 52.0 | 4.79e-01 | 100.0% | 89.4% |
| 4hlnA02 | 3.40.50.2000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; | 0.56 | 42.0 | 4.09e-01 | 100.0% | 69.7% |
| 1h5qA00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.55 | 51.0 | 4.58e-01 | 100.0% | 88.5% |
| 3hpxA01 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.55 | 47.0 | 4.07e-01 | 91.0% | 81.5% |
| 3i3oG00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.55 | 51.0 | 4.68e-01 | 100.0% | 83.7% |
| 1p1hB02 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.55 | 47.0 | 4.48e-01 | 92.1% | 99.1% |
| 3jviA00 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.55 | 41.0 | 4.45e-01 | 100.0% | 93.6% |
| 3c5vA00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.54 | 50.0 | 4.31e-01 | 100.0% | 83.0% |
| 3sy8C02 | 3.20.20.450 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › EAL domain | 0.54 | 45.0 | 4.12e-01 | 89.4% | 83.3% |
| 4cqbA02 | 3.20.20.140 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases | 0.54 | 49.0 | 4.17e-01 | 97.9% | 97.0% |
| 6e0bA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.54 | 48.0 | 3.89e-01 | 98.9% | 80.0% |
| 3l5lA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.54 | 49.0 | 3.97e-01 | 100.0% | 86.9% |
| 4gkbA00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.54 | 49.0 | 4.50e-01 | 100.0% | 87.9% |
| 1gu7A02 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.54 | 41.0 | 4.23e-01 | 98.4% | 83.4% |
| 5dmmA00 | 3.20.20.330 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Homocysteine-binding-like domain | 0.53 | 48.0 | 4.22e-01 | 98.9% | 99.3% |
| 1yt8A03 | 3.40.250.10 | Alpha Beta › 3-Layer(aba) Sandwich › Oxidized Rhodanese; domain 1 › Rhodanese-like domain | 0.53 | 27.0 | 3.59e-01 | 84.1% | 95.6% |
| 2p4hX00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.53 | 49.0 | 4.10e-01 | 100.0% | 72.9% |
| 4grfA00 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.52 | 32.0 | 3.63e-01 | 100.0% | 80.0% |
| 2basB01 | 3.20.20.450 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › EAL domain | 0.52 | 44.0 | 4.13e-01 | 89.4% | 91.2% |
| 1u1jA01 | 3.20.20.210 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › | 0.52 | 47.0 | 3.68e-01 | 97.9% | 89.8% |
| 1cz1A00 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.52 | 47.0 | 3.75e-01 | 100.0% | 90.1% |
| 1u2pA00 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.51 | 39.0 | 4.25e-01 | 100.0% | 96.2% |
| 1xviB01 | 3.40.50.1000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like | 0.51 | 36.0 | 4.03e-01 | 93.7% | 97.1% |
| 2obbA00 | 3.40.50.1000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like | 0.50 | 31.0 | 3.71e-01 | 100.0% | 93.4% |
| 2cunA01 | 3.40.50.1260 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Phosphoglycerate kinase, N-terminal domain | 0.50 | 42.0 | 4.10e-01 | 95.2% | 82.8% |
| 6ktqA01 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.50 | 43.0 | 3.77e-01 | 92.1% | 85.4% |
ECOD (95)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5024101 | 2006.1.6.12 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA_2 | 0.83 | 74.0 | 7.23e-01 | 100.0% | 86.2% |
| 3266779 | 2006.1.6.33 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA_4 | 0.82 | 76.0 | 6.91e-01 | 100.0% | 74.7% |
| 3639039 | 2006.1.6.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA | 0.82 | 73.0 | 6.79e-01 | 100.0% | 76.1% |
| 4986567 | 2006.1.6.45 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › PF30231 | 0.82 | 71.0 | 6.83e-01 | 100.0% | 80.5% |
| 5011082 | 2006.1.6.13 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA_3 | 0.81 | 68.0 | 6.64e-01 | 98.9% | 80.0% |
| 3263364 | 2006.1.6.12 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA_2 | 0.81 | 74.0 | 7.01e-01 | 100.0% | 82.3% |
| 5060607 | 2006.1.6.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA | 0.81 | 75.0 | 7.57e-01 | 100.0% | 96.8% |
| 5000961 | 2006.1.6.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like | 0.80 | 76.0 | 7.18e-01 | 100.0% | 97.3% |
| 4964793 | 2006.1.6.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA | 0.80 | 66.0 | 6.84e-01 | 100.0% | 91.4% |
| 4969295 | 2006.1.6.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like | 0.80 | 74.0 | 7.45e-01 | 100.0% | 96.8% |
| 3290325 | 2006.1.6.12 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA_2 | 0.80 | 76.0 | 7.53e-01 | 100.0% | 98.5% |
| 3699939 | 2006.1.6.13 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA_3 | 0.80 | 73.0 | 7.28e-01 | 100.0% | 93.3% |
| 4983318 | 2006.1.6.12 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA_2 | 0.80 | 67.0 | 6.61e-01 | 100.0% | 83.3% |
| 4263032 | 2006.1.6.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA | 0.80 | 70.0 | 7.12e-01 | 100.0% | 93.5% |
| 5052615 | 2006.1.6.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like | 0.80 | 72.0 | 6.96e-01 | 100.0% | 85.7% |
| 5051475 | 2006.1.6.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA | 0.79 | 68.0 | 6.44e-01 | 100.0% | 77.1% |
| 5035101 | 2006.1.6.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA | 0.79 | 75.0 | 6.92e-01 | 100.0% | 97.9% |
| 5049407 | 2006.1.6.12 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA_2 | 0.79 | 75.0 | 7.34e-01 | 100.0% | 99.0% |
| 4983536 | 2006.1.6.12 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA_2 | 0.79 | 75.0 | 6.85e-01 | 100.0% | 91.3% |
| 4141558 | 2006.1.6.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA | 0.79 | 71.0 | 7.13e-01 | 100.0% | 93.7% |
| 4927526 | 2006.1.6.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA | 0.79 | 68.0 | 6.33e-01 | 100.0% | 73.5% |
| 3927338 | 2006.1.6.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like | 0.79 | 75.0 | 5.73e-01 | 100.0% | 49.1% |
| 3550568 | 2006.1.6.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA | 0.79 | 70.0 | 6.46e-01 | 100.0% | 74.9% |
| 3934768 | 2006.1.6.33 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA_4 | 0.79 | 75.0 | 7.23e-01 | 100.0% | 90.5% |
| 3781974 | 2006.1.6.6 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › Ssl1 | 0.79 | 75.0 | 7.04e-01 | 100.0% | 87.6% |
| 3249751 | 2006.1.6.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA | 0.78 | 75.0 | 6.50e-01 | 100.0% | 74.8% |
| 3613044 | 2006.1.6.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like | 0.78 | 74.0 | 6.90e-01 | 98.9% | 97.8% |
| 3992096 | 2006.1.6.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like | 0.78 | 74.0 | 7.11e-01 | 100.0% | 89.5% |
| 3961457 | 2006.1.6.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like | 0.78 | 74.0 | 7.34e-01 | 100.0% | 97.9% |
| 4936416 | 2006.1.6.12 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA_2 | 0.78 | 73.0 | 6.62e-01 | 100.0% | 77.0% |
| 3852148 | 2006.1.6.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA | 0.78 | 69.0 | 6.71e-01 | 100.0% | 85.9% |
| 4971996 | 2006.1.6.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like | 0.77 | 73.0 | 7.09e-01 | 100.0% | 90.9% |
| 4588570 | 2006.1.6.4 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › Ku_N | 0.77 | 73.0 | 6.63e-01 | 100.0% | 93.5% |
| 2642990 | 2006.1.6.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA | 0.77 | 70.0 | 7.05e-01 | 100.0% | 95.2% |
| 5074364 | 2006.1.6.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like | 0.77 | 73.0 | 6.61e-01 | 100.0% | 98.4% |
| 3768874 | 2006.1.6.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA | 0.77 | 69.0 | 6.74e-01 | 100.0% | 86.8% |
| 3898833 | 2006.1.6.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA | 0.77 | 73.0 | 6.94e-01 | 100.0% | 87.9% |
| 3218356 | 2006.1.6.5 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › Tfb4 | 0.77 | 73.0 | 6.69e-01 | 100.0% | 94.0% |
| 3527783 | 2006.1.6.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA | 0.77 | 70.0 | 5.27e-01 | 100.0% | 43.6% |
| 3882106 | 2006.1.6.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA | 0.77 | 70.0 | 6.62e-01 | 100.0% | 82.3% |
| 3210113 | 2006.1.6.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA | 0.76 | 73.0 | 6.63e-01 | 100.0% | 82.5% |
| 5079558 | 2006.1.6.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like | 0.76 | 70.0 | 7.15e-01 | 98.9% | 98.9% |
| 3514419 | 2006.1.6.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA | 0.76 | 69.0 | 6.85e-01 | 100.0% | 91.8% |
| 4979858 | 2006.1.6.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like | 0.76 | 72.0 | 5.81e-01 | 99.5% | 64.5% |
| 3927341 | 2006.1.6.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like | 0.75 | 67.0 | 6.83e-01 | 100.0% | 96.8% |
| 3929333 | 2006.1.6.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like | 0.75 | 68.0 | 6.77e-01 | 100.0% | 93.3% |
| 4025297 | 2006.1.6.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA | 0.75 | 71.0 | 6.70e-01 | 100.0% | 86.8% |
| 3926566 | 2006.1.6.5 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › Tfb4 | 0.75 | 71.0 | 6.74e-01 | 100.0% | 93.0% |
| 4031918 | 2006.1.6.20 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › CobT_C | 0.74 | 70.0 | 6.10e-01 | 100.0% | 69.3% |
| 3234945 | 2006.1.6.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA | 0.74 | 69.0 | 6.75e-01 | 100.0% | 90.7% |
| 3631776 | 2006.1.6.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like | 0.74 | 67.0 | 6.65e-01 | 100.0% | 92.8% |
| 4188026 | 2007.1.3.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › Response_reg | 0.74 | 47.0 | 5.42e-01 | 98.4% | 86.4% |
| 3515473 | 2006.1.6.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like | 0.73 | 69.0 | 6.24e-01 | 100.0% | 93.5% |
| 3923133 | 2006.1.6.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA | 0.72 | 68.0 | 6.38e-01 | 100.0% | 83.1% |
| 4027796 | 2006.1.6.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA | 0.72 | 68.0 | 6.62e-01 | 100.0% | 91.7% |
| 3936045 | 2006.1.6.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like | 0.71 | 66.0 | 6.67e-01 | 100.0% | 100.0% |
| 4946250 | 2007.1.3.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like | 0.71 | 47.0 | 5.27e-01 | 100.0% | 84.7% |
| 3550235 | 2007.1.3.34 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › PDE8A_N | 0.69 | 45.0 | 4.97e-01 | 100.0% | 81.3% |
| 4330223 | 2007.1.3.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like | 0.69 | 48.0 | 5.49e-01 | 100.0% | 95.0% |
| 3252935 | 2006.1.6.10 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › Med25_VWA | 0.68 | 64.0 | 6.27e-01 | 99.5% | 97.0% |
| 5072653 | 2006.1.6.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like | 0.68 | 62.0 | 6.14e-01 | 100.0% | 93.8% |
| 4981979 | 2007.3.1.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Succinyl-CoA synthetase domains › Succinyl-CoA synthetase domains | 0.66 | 50.0 | 5.40e-01 | 100.0% | 91.9% |
| 5065636 | 2007.3.1.6 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Succinyl-CoA synthetase domains › Succinyl-CoA synthetase domains › Ligase_CoA_2 | 0.66 | 49.0 | 5.38e-01 | 100.0% | 93.5% |
| 4971384 | 2007.3.1.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Succinyl-CoA synthetase domains › Succinyl-CoA synthetase domains | 0.66 | 49.0 | 5.31e-01 | 100.0% | 90.6% |
| 5021693 | 2007.3.1.6 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Succinyl-CoA synthetase domains › Succinyl-CoA synthetase domains › Ligase_CoA_2 | 0.66 | 49.0 | 5.25e-01 | 100.0% | 91.1% |
| 5048414 | 2007.3.1.6 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Succinyl-CoA synthetase domains › Succinyl-CoA synthetase domains › Ligase_CoA_2 | 0.65 | 48.0 | 5.16e-01 | 100.0% | 87.9% |
| 4954306 | 2007.3.1.6 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Succinyl-CoA synthetase domains › Succinyl-CoA synthetase domains › Ligase_CoA_2 | 0.65 | 49.0 | 5.19e-01 | 100.0% | 88.5% |
| 4983989 | 2007.3.1.6 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Succinyl-CoA synthetase domains › Succinyl-CoA synthetase domains › Ligase_CoA_2 | 0.65 | 49.0 | 5.24e-01 | 100.0% | 91.3% |
| 4928481 | 2007.3.1.3 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Succinyl-CoA synthetase domains › Succinyl-CoA synthetase domains › Succ_CoA_lig | 0.65 | 49.0 | 3.82e-01 | 100.0% | 37.2% |
| 4638287 | 2007.3.1.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Succinyl-CoA synthetase domains › Succinyl-CoA synthetase domains | 0.64 | 48.0 | 5.28e-01 | 100.0% | 94.8% |
| 4131482 | 2007.3.1.6 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Succinyl-CoA synthetase domains › Succinyl-CoA synthetase domains › Ligase_CoA_2 | 0.64 | 48.0 | 5.19e-01 | 100.0% | 91.3% |
| 4984567 | 2007.3.1.6 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Succinyl-CoA synthetase domains › Succinyl-CoA synthetase domains › Ligase_CoA_2 | 0.64 | 48.0 | 5.08e-01 | 100.0% | 87.3% |
| 4956940 | 2007.3.1.6 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Succinyl-CoA synthetase domains › Succinyl-CoA synthetase domains › Ligase_CoA_2 | 0.64 | 48.0 | 5.21e-01 | 100.0% | 91.9% |
| 3793098 | 7590.1.1.2 ↗ | a/b three-layered sandwiches › Middle domain in Argonaute homologs › Middle domain in Argonaute homologs › Middle domain in Argonaute homologs › Piwi | 0.64 | 42.0 | 4.49e-01 | 100.0% | 75.2% |
| 5048493 | 2007.3.1.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Succinyl-CoA synthetase domains › Succinyl-CoA synthetase domains | 0.64 | 49.0 | 5.32e-01 | 100.0% | 94.4% |
| 4947087 | 2007.3.1.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Succinyl-CoA synthetase domains › Succinyl-CoA synthetase domains | 0.64 | 48.0 | 5.25e-01 | 100.0% | 94.2% |
| 5030485 | 2007.3.1.6 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Succinyl-CoA synthetase domains › Succinyl-CoA synthetase domains › Ligase_CoA_2 | 0.64 | 48.0 | 5.17e-01 | 100.0% | 91.9% |
| 4981411 | 2007.3.1.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Succinyl-CoA synthetase domains › Succinyl-CoA synthetase domains | 0.64 | 48.0 | 5.07e-01 | 100.0% | 86.5% |
| 4973063 | 2007.3.1.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Succinyl-CoA synthetase domains › Succinyl-CoA synthetase domains | 0.64 | 48.0 | 5.16e-01 | 100.0% | 91.9% |
| 5057539 | 2007.3.1.6 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Succinyl-CoA synthetase domains › Succinyl-CoA synthetase domains › Ligase_CoA_2 | 0.64 | 48.0 | 5.12e-01 | 100.0% | 89.1% |
| 5071155 | 2007.3.1.6 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Succinyl-CoA synthetase domains › Succinyl-CoA synthetase domains › Ligase_CoA_2 | 0.63 | 48.0 | 5.22e-01 | 100.0% | 94.4% |
| 4983544 | 2007.3.1.6 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Succinyl-CoA synthetase domains › Succinyl-CoA synthetase domains › Ligase_CoA_2 | 0.63 | 49.0 | 5.06e-01 | 100.0% | 87.4% |
| 5075646 | 2007.3.1.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Succinyl-CoA synthetase domains › Succinyl-CoA synthetase domains | 0.62 | 49.0 | 5.21e-01 | 100.0% | 93.9% |
| 4978805 | 2007.3.1.6 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Succinyl-CoA synthetase domains › Succinyl-CoA synthetase domains › Ligase_CoA_2 | 0.62 | 47.0 | 5.08e-01 | 100.0% | 93.8% |
| 3968080 | 2007.3.1.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Succinyl-CoA synthetase domains › Succinyl-CoA synthetase domains | 0.60 | 46.0 | 4.94e-01 | 100.0% | 92.7% |
| 5066188 | 2007.3.1.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Succinyl-CoA synthetase domains › Succinyl-CoA synthetase domains | 0.60 | 49.0 | 5.10e-01 | 100.0% | 95.3% |
| 4979001 | 2007.3.1.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Succinyl-CoA synthetase domains › Succinyl-CoA synthetase domains | 0.58 | 48.0 | 4.88e-01 | 100.0% | 88.3% |
| 5049491 | 2007.2.5.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › Rhodanese/Cell cycle control phosphatase › Rhodanese | 0.58 | 29.0 | 3.57e-01 | 97.9% | 73.3% |
| 5047781 | 2007.3.1.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Succinyl-CoA synthetase domains › Succinyl-CoA synthetase domains | 0.57 | 47.0 | 4.84e-01 | 100.0% | 90.7% |
| 3475375 | 2003.4.1.1 ↗ | a/b three-layered sandwiches › Rossmann-like › Tryptophan synthase beta subunit-like PLP-dependent enzymes › Tryptophan synthase beta subunit-like PLP-dependent enzymes › PALP | 0.56 | 31.0 | 3.70e-01 | 74.1% | 78.4% |
| 3926262 | 2007.1.2.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I | 0.56 | 49.0 | 4.52e-01 | 100.0% | 74.0% |
| 4011315 | 7512.1.1.0 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase | 0.55 | 46.0 | 4.24e-01 | 100.0% | 68.8% |
| 2114449 | 2002.1.1.32 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Oxidored_FMN | 0.53 | 48.0 | 3.86e-01 | 98.9% | 90.5% |
| 5057668 | 7512.1.1.30 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_transf_4 | 0.52 | 47.0 | 4.59e-01 | 98.4% | 90.5% |
| 4136884 | 2006.1.6.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like | 0.50 | 45.0 | 4.35e-01 | 100.0% | 99.1% |
D2
medium
residues 31-84
Domain cluster:
representative
CATH (8)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2f4mA02 | 2.20.25.10 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › | 0.61 | 40.0 | 4.12e-01 | 96.3% | 72.0% |
| 1ynjD03 | 2.40.50.100 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain | 0.57 | 40.0 | 4.05e-01 | 96.3% | 75.5% |
| 1g8jB00 | 2.102.10.10 | Mainly Beta › 3-layer Sandwich › Rieske Iron-sulfur Protein › Rieske [2Fe-2S] iron-sulphur domain | 0.56 | 40.0 | 3.12e-01 | 77.8% | 97.7% |
| 3ho6B00 | 3.40.50.11050 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › MARTX cysteine protease (CPD) domain | 0.55 | 45.0 | 3.06e-01 | 98.1% | 43.9% |
| 5unhA02 | 1.20.1070.10 | Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins | 0.55 | 40.0 | 2.61e-01 | 81.5% | 33.8% |
| 1dbzA01 | 3.30.540.10 | Alpha Beta › 2-Layer Sandwich › Fructose-1,6-Bisphosphatase; Chain A, domain 1 › Fructose-1,6-Bisphosphatase, subunit A, domain 1 | 0.54 | 38.0 | 2.70e-01 | 75.9% | 100.0% |
| 2gq1A01 | 3.30.540.10 | Alpha Beta › 2-Layer Sandwich › Fructose-1,6-Bisphosphatase; Chain A, domain 1 › Fructose-1,6-Bisphosphatase, subunit A, domain 1 | 0.51 | 37.0 | 2.79e-01 | 83.3% | 64.7% |
| 5c5cA02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.50 | 31.0 | 2.31e-01 | 98.1% | 19.5% |
ECOD (10)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3410518 | 2002.1.1.106 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › GDPD | 0.58 | 46.0 | 2.95e-01 | 96.3% | 28.8% |
| 3739345 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.56 | 45.0 | 3.33e-01 | 100.0% | 51.7% |
| 3428317 | 708.1.1.7 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain › DBD_Tnp_Mut | 0.55 | 42.0 | 3.88e-01 | 87.0% | 94.7% |
| 3676635 | 708.1.1.7 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain › DBD_Tnp_Mut | 0.54 | 38.0 | 3.47e-01 | 77.8% | 82.5% |
| 3253426 | 2.1.1.28 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › mRNA_cap_C | 0.54 | 44.0 | 3.47e-01 | 96.3% | 59.2% |
| 3310146 | 206.1.3.0 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp | 0.54 | 44.0 | 2.73e-01 | 96.3% | 17.8% |
| 3719891 | 2.1.1.28 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › mRNA_cap_C | 0.54 | 44.0 | 3.54e-01 | 96.3% | 68.7% |
| 4880797 | 60.1.1.2 ↗ | beta barrels › SPOC domain-like › SPOC domain-related › SPOC domain › Med25 | 0.53 | 44.0 | 3.32e-01 | 94.4% | 81.6% |
| 3376913 | 2.1.1.28 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › mRNA_cap_C | 0.52 | 42.0 | 3.48e-01 | 96.3% | 59.1% |
| 4629857 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.51 | 40.0 | 3.80e-01 | 94.4% | 94.3% |
D3
medium
residues 85-163
Domain cluster:
representative
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF11617.14 best | Cu-binding_MopE | 23.5 | 7.10e-05 | 27.9% | 56.7% |
| PF11617.14 | Cu-binding_MopE | 24.2 | 4.50e-05 | 22.8% | 53.3% |
CATH (3)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3kz5E00 | 6.10.140.1550 | Special › Helix non-globular › Helix Hairpins › | 0.57 | 28.0 | 3.46e-01 | 70.9% | 75.0% |
| 1ioxA00 | 2.10.25.10 | Mainly Beta › Ribbon › Laminin › Laminin | 0.55 | 33.0 | 3.80e-01 | 77.2% | 94.0% |
| 3d3zA00 | 3.90.730.10 | Alpha Beta › Alpha-Beta Complex › Ribonuclease Rh; Chain A › Ribonuclease T2-like | 0.50 | 39.0 | 2.90e-01 | 87.3% | 97.5% |
ECOD (15)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3408240 | 394.1.1.1 ↗ | few secondary structure elements › Invertebrate chitin-binding proteins › Invertebrate chitin-binding proteins › Invertebrate chitin-binding proteins › CBM_14 | 0.71 | 34.0 | 3.98e-01 | 70.9% | 64.8% |
| 3412041 | 394.1.1.1 ↗ | few secondary structure elements › Invertebrate chitin-binding proteins › Invertebrate chitin-binding proteins › Invertebrate chitin-binding proteins › CBM_14 | 0.68 | 33.0 | 3.96e-01 | 70.9% | 70.0% |
| 3417171 | 394.1.1.1 ↗ | few secondary structure elements › Invertebrate chitin-binding proteins › Invertebrate chitin-binding proteins › Invertebrate chitin-binding proteins › CBM_14 | 0.66 | 32.0 | 3.88e-01 | 70.9% | 72.0% |
| 3411479 | 394.1.1.1 ↗ | few secondary structure elements › Invertebrate chitin-binding proteins › Invertebrate chitin-binding proteins › Invertebrate chitin-binding proteins › CBM_14 | 0.66 | 32.0 | 3.64e-01 | 70.9% | 60.0% |
| 3221500 | 394.1.1.1 ↗ | few secondary structure elements › Invertebrate chitin-binding proteins › Invertebrate chitin-binding proteins › Invertebrate chitin-binding proteins › CBM_14 | 0.61 | 29.0 | 3.72e-01 | 70.9% | 79.1% |
| 3625156 | 394.1.1.1 ↗ | few secondary structure elements › Invertebrate chitin-binding proteins › Invertebrate chitin-binding proteins › Invertebrate chitin-binding proteins › CBM_14 | 0.60 | 29.0 | 3.35e-01 | 70.9% | 61.8% |
| 3395116 | 394.1.1.1 ↗ | few secondary structure elements › Invertebrate chitin-binding proteins › Invertebrate chitin-binding proteins › Invertebrate chitin-binding proteins › CBM_14 | 0.59 | 32.0 | 3.67e-01 | 74.7% | 72.7% |
| 3539203 | 391.1.2.11 ↗ | few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › VWC domain-related › VWC2L_2nd | 0.55 | 32.0 | 3.62e-01 | 82.3% | 76.7% |
| 3559921 | 389.1.1.98 ↗ | few secondary structure elements › EGF-like › EGF-related › EGF/Laminin › EGF_CA, cEGF | 0.53 | 35.0 | 3.85e-01 | 91.1% | 96.4% |
| 3226734 | 389.1.1.1 ↗ | few secondary structure elements › EGF-like › EGF-related › EGF/Laminin › EGF | 0.52 | 32.0 | 3.92e-01 | 84.8% | 98.0% |
| 3525132 | 389.1.1.7 ↗ | few secondary structure elements › EGF-like › EGF-related › EGF/Laminin › EGF_CA | 0.52 | 35.0 | 3.83e-01 | 92.4% | 93.3% |
| 3872231 | 391.1.2.11 ↗ | few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › VWC domain-related › VWC2L_2nd | 0.52 | 32.0 | 3.67e-01 | 81.0% | 87.3% |
| 3618014 | 394.1.1.0 ↗ | few secondary structure elements › Invertebrate chitin-binding proteins › Invertebrate chitin-binding proteins › Invertebrate chitin-binding proteins | 0.52 | 29.0 | 3.72e-01 | 79.7% | 100.0% |
| 4282559 | 389.1.1.7 ↗ | few secondary structure elements › EGF-like › EGF-related › EGF/Laminin › EGF_CA | 0.51 | 34.0 | 3.96e-01 | 89.9% | 100.0% |
| 3644667 | 7516.1.1.41 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glucan_synthase | 0.50 | 40.0 | 2.77e-01 | 92.4% | 86.0% |
D4
medium
residues 164-221
Domain cluster:
representative
CATH (8)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4c23B01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.56 | 36.0 | 2.46e-01 | 94.8% | 16.2% |
| 3mdqA01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.55 | 35.0 | 2.83e-01 | 93.1% | 29.3% |
| 1p9rA01 | 3.30.450.90 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › | 0.55 | 33.0 | 2.72e-01 | 84.5% | 29.7% |
| 4a2bA01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.54 | 35.0 | 2.71e-01 | 93.1% | 26.8% |
| 3lrrA00 | 2.170.150.30 | Mainly Beta › Beta Complex › Metal Binding Protein, Guanine Nucleotide Exchange Factor; Chain A › RIG-I-like receptor, C-terminal regulatory domain | 0.53 | 40.0 | 3.21e-01 | 82.8% | 39.7% |
| 6u5vB07 | 3.30.1120.100 | Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › | 0.51 | 42.0 | 3.37e-01 | 96.6% | 49.6% |
| 1wraA01 | 3.60.15.10 | Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like | 0.51 | 41.0 | 2.70e-01 | 98.3% | 39.7% |
| 2rfrA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.50 | 41.0 | 3.08e-01 | 93.1% | 49.4% |
ECOD (11)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3644667 | 7516.1.1.41 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glucan_synthase | 0.56 | 33.0 | 2.04e-01 | 91.4% | 9.9% |
| 5070445 | 2484.1.1.38 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › eRF1_2 | 0.56 | 34.0 | 2.75e-01 | 94.8% | 28.3% |
| 4282149 | 2484.1.1.38 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › eRF1_2 | 0.56 | 36.0 | 2.94e-01 | 100.0% | 31.7% |
| 3193627 | 3447.1.1.3 ↗ | alpha bundles › Isoprenylcysteine carboxyl methyltransferase (ICMT) › Isoprenylcysteine carboxyl methyltransferase (ICMT) › Isoprenylcysteine carboxyl methyltransferase (ICMT) › DUF1295 | 0.54 | 44.0 | 2.89e-01 | 96.6% | 62.9% |
| 3323400 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.54 | 33.0 | 2.74e-01 | 93.1% | 29.2% |
| 3207467 | 2484.1.1.38 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › eRF1_2 | 0.53 | 35.0 | 2.66e-01 | 94.8% | 26.5% |
| 4822969 | 3618.1.1.0 ↗ | beta complex topology › Flagellin beta sheet domain › Flagellin beta sheet domain › Flagellin beta sheet domain | 0.53 | 35.0 | 3.34e-01 | 100.0% | 57.1% |
| 165237 | 286.1.1.3 ↗ | a+b complex topology › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like › PrpF | 0.52 | 34.0 | 2.40e-01 | 96.6% | 18.8% |
| 4981101 | 2006.1.3.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain | 0.52 | 37.0 | 2.92e-01 | 89.7% | 33.3% |
| 3566614 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.51 | 36.0 | 2.91e-01 | 94.8% | 36.0% |
| 5037599 | 5.1.5.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed | 0.51 | 31.0 | 2.04e-01 | 84.5% | 12.1% |