Back to structures

ankyrin-repeat_protein

Euk-Vir

NY_014_poxvirus

ankyrin-repeat_protein__YP_009408397__NY_014_poxvirus__2025360

Identity

Accession:
YP_009408397 ↗
Protein ID:
ankyrin-repeat_protein
Kingdom:
euk

Quality

88.6 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 494-567
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF09372.16 best PRANC 34.9 2.10e-08 90.5% 66.0%
CATH (5)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1tjlA00 1.20.120.910 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › DksA, coiled-coil domain 0.72 51.0 4.00e-01 73.0% 42.8%
4g6dB02 6.10.140.1800 Special › Helix non-globular › Helix Hairpins › 0.67 51.0 4.97e-01 97.3% 74.1%
4d6wB02 6.10.140.740 Special › Helix non-globular › Helix Hairpins › 0.66 48.0 4.48e-01 78.4% 62.0%
2icwG01 1.20.120.390 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Hla class ii histocompatibility antigen, dr alpha chain. Chain D, domain 1 0.64 48.0 4.05e-01 81.1% 62.9%
3d85C00 1.20.1250.10 Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › 0.59 42.0 3.52e-01 74.3% 61.7%
ECOD (7)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3740294 3826.1.1.0 alpha bundles › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) 0.75 58.0 4.50e-01 81.1% 49.3%
3856933 604.9.1.0 alpha bundles › Spectrin repeat-like › Ribosomal protein S20 › Ribosomal protein S20 0.72 51.0 4.80e-01 74.3% 61.1%
3918242 3628.1.1.1 a+b complex topology › Transcription factor tau 60 kDa subunit › Transcription factor tau 60 kDa subunit › Transcription factor tau 60 kDa subunit › zf-TFIIIC 0.64 56.0 4.04e-01 97.3% 62.4%
3985403 5041.1.1.0 extended segments › F1F0 ATP synthase subunit C › F1F0 ATP synthase subunit C › F1F0 ATP synthase subunit C 0.62 45.0 4.41e-01 77.0% 75.0%
3414500 7023.1.1.0 alpha bundles › helical ridge domain of D-alanyl transfer protein › helical ridge domain of D-alanyl transfer protein › helical ridge domain of D-alanyl transfer protein 0.59 39.0 3.39e-01 70.3% 43.5%
3935894 101.1.2.200 alpha arrays › HTH › HTH › winged helix domain › HTH_65 0.59 41.0 3.79e-01 73.0% 71.6%
3168854 4970.1.1.13 alpha bundles › fingers domain in bacteriophage RB69-like DNA polymerase I › fingers domain in bacteriophage RB69-like DNA polymerase I › fingers domain in bacteriophage RB69-like DNA polymerase I › zf-C4pol 0.58 49.0 4.24e-01 97.3% 60.6%
D2 medium residues 1-135_154-164
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF12796.14 best Ank_2 30.3 6.90e-07 58.9% 60.0%
D3 medium residues 136-153_165-295
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF00023.37 best Ank 16.5 1.20e-02 24.8% 93.9%
D4 medium residues 296-390
PDB
Pfam (2)
AccessionNameScoreE-valueQ covHMM cov
PF12796.14 best Ank_2 34.1 4.50e-08 96.8% 83.3%
PF00023.37 Ank 16.4 1.30e-02 34.7% 100.0%
D5 medium residues 391-493
PDB