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ankyrin_repeat_domain

Euk-Vir

Pandoravirus_salinus

ankyrin_repeat_domain__YP_008437958__Pandoravirus_salinus__1349410

Identity

Accession:
YP_008437958 ↗
Protein ID:
ankyrin_repeat_domain
Kingdom:
euk

Quality

85.5 mean pLDDT

Taxonomy

TaxID: 1349410

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D3 medium residues 435-484
PDB
CATH (32)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3b7bB00 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.94 85.0 5.31e-01 96.0% 24.1%
3ljnA00 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.94 88.0 5.22e-01 100.0% 18.4%
3ehrA02 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.93 83.0 6.11e-01 96.0% 46.6%
2zgdA00 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.92 85.0 6.66e-01 100.0% 58.8%
4uucA00 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.92 85.0 5.35e-01 100.0% 27.6%
5eidA00 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.91 84.0 6.13e-01 100.0% 50.4%
5aarA00 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.91 84.0 5.52e-01 100.0% 33.0%
6if3A00 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.90 82.0 5.60e-01 100.0% 37.1%
4qfvC02 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.90 81.0 7.38e-01 98.0% 84.6%
5cecB00 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.88 80.0 5.26e-01 100.0% 29.5%
3lvqE03 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.87 78.0 7.35e-01 98.0% 93.2%
4hbdA00 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.87 78.0 4.88e-01 100.0% 26.1%
2i2xB01 1.10.1240.10 Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › Methionine synthase domain 0.74 63.0 5.11e-01 100.0% 75.0%
3beyD00 1.20.1290.10 Mainly Alpha › Up-down Bundle › AhpD-like › AhpD-like 0.70 51.0 4.16e-01 78.0% 48.9%
2d9dA00 1.20.58.120 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › BAG domain 0.69 51.0 4.27e-01 82.0% 74.2%
3d7iB00 1.20.1290.10 Mainly Alpha › Up-down Bundle › AhpD-like › AhpD-like 0.67 55.0 4.57e-01 100.0% 60.2%
7xcnM01 1.10.1240.10 Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › Methionine synthase domain 0.65 53.0 4.77e-01 100.0% 100.0%
1yxrA01 1.20.58.80 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit 0.61 48.0 4.27e-01 90.0% 81.1%
4g4sO01 3.40.50.12120 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › POC1 chaperone 0.59 48.0 3.32e-01 100.0% 61.5%
2rldA00 1.20.1440.60 Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › 23S rRNA-intervening sequence 0.58 44.0 3.53e-01 90.0% 57.0%
2k19A00 1.20.1440.140 Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › 0.57 42.0 3.54e-01 86.0% 77.6%
2wwwC01 1.20.5.170 Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › 0.57 39.0 3.97e-01 78.0% 96.2%
1puoB00 1.20.920.50 Mainly Alpha › Up-down Bundle › Histone Acetyltransferase; Chain A › 0.56 50.0 3.59e-01 100.0% 86.6%
2uyyA02 1.10.1040.10 Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 0.56 42.0 3.35e-01 90.0% 78.9%
3oqiA00 3.40.50.11710 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Cyclodipeptide synthase 0.55 44.0 3.04e-01 100.0% 41.0%
3g0oA02 1.10.1040.10 Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 0.55 42.0 3.34e-01 90.0% 80.2%
2p67A01 1.20.5.170 Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › 0.55 43.0 4.27e-01 94.0% 100.0%
2cr7A01 1.20.1160.11 Mainly Alpha › Up-down Bundle › Paired amphipathic helix 2 (pah2 repeat) › Paired amphipathic helix 0.53 37.0 3.59e-01 80.0% 71.4%
1vt0k00 1.10.3230.20 Mainly Alpha › Orthogonal Bundle › Hypothetical protein yqbg › P22 tail accessory factor (Gp4) 0.52 42.0 3.18e-01 100.0% 66.2%
4ar9A02 1.10.390.20 Mainly Alpha › Orthogonal Bundle › Neutral Protease; domain 2 › 0.51 38.0 2.84e-01 90.0% 29.6%
4od8D00 6.10.140.1880 Special › Helix non-globular › Helix Hairpins › 0.51 37.0 3.73e-01 90.0% 84.3%
4hn9A02 1.20.58.2180 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.51 38.0 3.56e-01 100.0% 64.7%
ECOD (89)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3255754 109.3.1.8 alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank_2 0.96 90.0 5.08e-01 100.0% 11.8%
3260808 109.3.1.8 alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank_2 0.94 88.0 5.38e-01 100.0% 19.6%
3267275 109.3.1.2 alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank,Ank_2 0.92 86.0 5.60e-01 100.0% 27.0%
3248202 109.3.1.10 alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank_4 0.92 83.0 5.50e-01 100.0% 28.0%
3198211 109.3.1.347 alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank, Ank_2, Ank_KRIT1 0.91 84.0 4.88e-01 100.0% 13.9%
3272965 109.3.1.8 alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank_2 0.91 86.0 6.46e-01 100.0% 47.6%
3695738 109.3.1.232 alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank, Ank_2, Ank_4, Ank_KRIT1 0.89 81.0 4.67e-01 100.0% 12.3%
4325700 109.3.1.164 alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank, Ank_2, Ank_3, Ank_4 0.88 80.0 5.46e-01 100.0% 35.6%
3264552 109.3.1.0 alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat 0.86 76.0 6.16e-01 100.0% 57.9%
3733316 109.3.1.0 alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat 0.86 78.0 6.73e-01 100.0% 76.0%
3733315 109.3.1.166 alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank, Ank_2, Ank_3 0.85 75.0 4.95e-01 100.0% 26.3%
3325965 109.4.1.1371 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, Eplus_motif, E_motif 0.82 71.0 4.09e-01 100.0% 12.4%
3830169 109.4.1.1383 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, PPR_3, DYW_deaminase, Eplus_motif, E_motif 0.76 65.0 3.60e-01 100.0% 8.7%
3185037 109.4.1.1258 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_1, PPR_2 0.76 65.0 3.56e-01 100.0% 7.4%
3802549 109.4.1.1519 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR_1, PPR_2, PPR_3, PPR_long, TPR_24 0.76 64.0 3.88e-01 100.0% 17.1%
3325952 109.4.1.883 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 0.76 64.0 3.99e-01 100.0% 23.1%
3297911 109.4.1.883 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 0.75 64.0 4.21e-01 100.0% 29.3%
3425838 109.4.1.883 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 0.75 63.0 4.03e-01 96.0% 24.5%
3300364 109.4.1.1258 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_1, PPR_2 0.74 64.0 4.22e-01 100.0% 28.8%
3644797 109.4.1.1292 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_1, PPR_2, PPR_3 0.73 61.0 4.12e-01 100.0% 26.2%
3308808 109.4.1.1256 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, PPR_3 0.73 63.0 3.58e-01 100.0% 11.0%
3813895 109.4.1.883 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 0.73 62.0 3.82e-01 100.0% 20.0%
3347173 109.4.1.1330 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR_1, PPR_2, PPR_3, PPR_long 0.73 63.0 4.62e-01 100.0% 47.1%
3675551 109.4.1.189 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR_2 0.73 63.0 4.37e-01 100.0% 35.8%
3883328 109.4.1.420 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR 0.73 63.0 5.17e-01 100.0% 61.1%
3311441 109.4.1.1257 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR_1, PPR_2 0.73 62.0 4.12e-01 100.0% 28.6%
3644581 109.4.1.1260 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, PPR_3, PPR_long 0.73 63.0 4.17e-01 100.0% 30.7%
3204973 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.72 62.0 3.50e-01 100.0% 12.1%
3326180 109.4.1.1295 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, PPR_3, TPR_24 0.72 63.0 4.02e-01 100.0% 26.4%
3353448 109.4.1.1273 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_3 0.72 60.0 4.05e-01 100.0% 28.6%
3682286 109.4.1.883 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 0.72 59.0 4.44e-01 100.0% 42.1%
3829197 109.4.1.1305 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, PPR_3, PPR_long, TPR_24 0.71 61.0 3.81e-01 100.0% 22.4%
3818397 109.4.1.1277 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR_1, PPR_2, TPR_24 0.71 61.0 4.49e-01 100.0% 47.1%
3330217 109.4.1.1273 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_3 0.71 59.0 3.81e-01 100.0% 23.5%
3337409 109.4.1.1277 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR_1, PPR_2, TPR_24 0.71 62.0 4.56e-01 100.0% 48.9%
3446153 109.4.1.1292 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_1, PPR_2, PPR_3 0.71 61.0 3.96e-01 100.0% 27.5%
3380640 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.71 59.0 3.81e-01 96.0% 24.8%
3424467 109.4.1.1262 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_1, PPR_2, PPR_long 0.71 60.0 3.87e-01 98.0% 25.3%
3426414 109.4.1.1262 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_1, PPR_2, PPR_long 0.71 61.0 4.50e-01 100.0% 48.9%
3830981 109.4.1.1257 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR_1, PPR_2 0.71 61.0 4.07e-01 100.0% 32.2%
3437568 109.4.1.1262 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_1, PPR_2, PPR_long 0.71 60.0 3.91e-01 100.0% 27.5%
3363653 109.4.1.1262 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_1, PPR_2, PPR_long 0.71 60.0 4.29e-01 100.0% 36.3%
3822360 109.4.1.1261 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR_1, PPR_2, PPR_long 0.71 61.0 4.17e-01 100.0% 35.7%
3803781 109.4.1.883 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 0.71 59.0 3.98e-01 100.0% 26.2%
3333064 109.4.1.1525 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, DYW_deaminase 0.71 58.0 3.44e-01 100.0% 14.0%
3807489 109.4.1.1262 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_1, PPR_2, PPR_long 0.70 60.0 3.80e-01 100.0% 23.6%
3296860 109.4.1.883 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 0.70 60.0 3.84e-01 100.0% 23.0%
3666211 109.4.1.883 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 0.70 61.0 4.45e-01 100.0% 47.1%
3320043 109.4.1.883 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 0.70 58.0 4.00e-01 100.0% 30.8%
3307749 109.4.1.420 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR 0.70 59.0 4.69e-01 100.0% 46.4%
3298908 109.4.1.1295 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, PPR_3, TPR_24 0.70 58.0 3.48e-01 100.0% 15.1%
3669291 109.4.1.1282 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_1, PPR_2, TPR_24 0.70 60.0 3.87e-01 100.0% 26.4%
3814766 109.4.1.1262 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_1, PPR_2, PPR_long 0.70 61.0 4.44e-01 100.0% 47.1%
3341939 109.4.1.1261 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR_1, PPR_2, PPR_long 0.70 60.0 4.79e-01 100.0% 62.9%
3681462 109.4.1.1277 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR_1, PPR_2, TPR_24 0.70 61.0 4.44e-01 100.0% 47.1%
3648617 109.4.1.1261 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR_1, PPR_2, PPR_long 0.70 58.0 3.96e-01 100.0% 33.0%
3676107 109.4.1.883 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 0.70 59.0 4.56e-01 100.0% 52.5%
3676413 109.4.1.1260 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, PPR_3, PPR_long 0.70 59.0 3.90e-01 100.0% 29.3%
3668277 109.4.1.1279 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_1, PPR_2, PPR_long, TPR_24 0.69 59.0 3.76e-01 100.0% 22.6%
3456580 109.4.1.883 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 0.69 60.0 4.18e-01 100.0% 36.5%
3834601 109.4.1.189 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR_2 0.69 58.0 4.73e-01 98.0% 65.0%
3384024 109.4.1.420 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR 0.69 59.0 4.87e-01 100.0% 61.1%
3340216 109.4.1.1330 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR_1, PPR_2, PPR_3, PPR_long 0.69 59.0 3.89e-01 100.0% 29.3%
3341938 109.4.1.1258 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_1, PPR_2 0.69 59.0 4.73e-01 100.0% 60.0%
3809459 109.4.1.189 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR_2 0.69 58.0 4.48e-01 100.0% 49.6%
3818396 109.4.1.1277 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR_1, PPR_2, TPR_24 0.69 59.0 4.34e-01 100.0% 47.1%
3308044 109.4.1.189 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR_2 0.68 59.0 4.37e-01 100.0% 48.9%
3828676 109.4.1.1257 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR_1, PPR_2 0.68 57.0 4.60e-01 98.0% 55.2%
3344060 109.4.1.1261 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR_1, PPR_2, PPR_long 0.68 58.0 4.02e-01 100.0% 32.8%
3815515 109.4.1.1261 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR_1, PPR_2, PPR_long 0.68 58.0 3.93e-01 100.0% 33.0%
3301013 109.4.1.1257 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR_1, PPR_2 0.68 57.0 4.27e-01 100.0% 46.4%
3364087 109.4.1.420 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR 0.68 58.0 4.04e-01 100.0% 35.6%
3363286 109.4.1.883 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 0.68 56.0 4.05e-01 100.0% 33.9%
3810356 109.4.1.883 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 0.68 56.0 4.12e-01 100.0% 37.3%
3312003 109.4.1.1258 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_1, PPR_2 0.68 56.0 4.54e-01 100.0% 54.6%
3305974 109.4.1.420 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR 0.67 55.0 4.02e-01 100.0% 36.1%
3819865 109.4.1.420 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR 0.67 55.0 3.83e-01 100.0% 28.9%
3659727 109.4.1.420 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR 0.67 56.0 4.37e-01 100.0% 43.3%
3349082 109.4.1.420 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR 0.67 56.0 4.30e-01 100.0% 51.2%
3334592 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.67 53.0 4.07e-01 100.0% 38.6%
3675553 109.4.1.883 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 0.67 57.0 4.09e-01 100.0% 40.0%
3823752 109.4.1.1293 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_1 0.66 57.0 3.76e-01 100.0% 26.7%
3831817 109.4.1.1256 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, PPR_3 0.66 57.0 4.05e-01 100.0% 41.2%
3661675 109.4.1.883 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 0.66 57.0 4.28e-01 100.0% 48.5%
3359438 109.4.1.1560 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_3, E_motif 0.66 57.0 3.44e-01 100.0% 17.2%
3657259 109.4.1.420 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR 0.66 56.0 4.19e-01 100.0% 52.6%
3348499 109.4.1.883 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 0.65 55.0 4.52e-01 100.0% 52.0%
3813220 109.4.1.1293 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_1 0.64 51.0 3.34e-01 100.0% 23.0%
3846040 109.4.1.190 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_6 0.57 47.0 3.16e-01 100.0% 24.5%
D4 medium residues 485-545
PDB
Domain cluster: representative
CATH (28)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1wdyA00 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.85 74.0 4.67e-01 95.1% 24.2%
4rlyA00 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.81 70.0 4.39e-01 95.1% 22.1%
4uucA00 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.81 70.0 4.69e-01 95.1% 30.3%
4qfvC02 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.80 66.0 6.47e-01 88.5% 90.8%
4bszB00 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.79 68.0 5.05e-01 95.1% 52.0%
2zgdA00 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.79 66.0 5.61e-01 91.8% 61.9%
5h28A02 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.79 69.0 5.60e-01 96.7% 75.9%
3ljnA00 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.78 67.0 4.23e-01 95.1% 22.4%
4jgiA01 1.10.1240.10 Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › Methionine synthase domain 0.68 56.0 5.16e-01 93.4% 100.0%
3uo2B02 1.20.1280.20 Mainly Alpha › Up-down Bundle › Monooxygenase › HscB, C-terminal domain 0.67 46.0 4.17e-01 72.1% 85.7%
2i5tA00 3.10.490.10 Alpha Beta › Roll › Hypothetical upf0131 protein ytfp › Gamma-glutamyl cyclotransferase-like 0.65 52.0 3.84e-01 90.2% 89.9%
2uubT00 1.20.58.110 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Ribosomal protein S20 0.64 51.0 4.43e-01 90.2% 77.8%
3p4tA01 1.10.540.10 Mainly Alpha › Orthogonal Bundle › Butyryl-Coa Dehydrogenase, subunit A; domain 1 › Acyl-CoA dehydrogenase/oxidase, N-terminal domain 0.64 51.0 4.14e-01 88.5% 88.2%
5c8aA01 1.10.1240.10 Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › Methionine synthase domain 0.63 51.0 4.76e-01 90.2% 96.2%
5llmA00 1.10.3860.10 Mainly Alpha › Orthogonal Bundle › Proton glutamate symport protein › Sodium:dicarboxylate symporter 0.63 44.0 2.73e-01 75.4% 67.2%
2ou3A01 1.10.3680.10 Mainly Alpha › Orthogonal Bundle › TerB-like › TerB-like 0.63 48.0 3.70e-01 86.9% 66.2%
2qw6D00 1.20.272.10 Mainly Alpha › Up-down Bundle › Zinc Finger, Delta Prime; domain 3 › 0.63 49.0 4.44e-01 88.5% 81.4%
1yxrA01 1.20.58.80 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit 0.61 44.0 4.17e-01 78.7% 93.2%
3u8vA00 1.20.120.660 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › IL-4 antagonist (De novo design) like domain 0.59 42.0 3.90e-01 78.7% 71.1%
3qilB00 1.25.40.730 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.58 45.0 3.99e-01 95.1% 56.7%
3oxfA05 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.57 42.0 3.98e-01 82.0% 96.0%
3dptB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.55 39.0 3.83e-01 78.7% 94.2%
4dvyP03 1.20.120.1270 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › CagA exotoxin domain III 0.54 39.0 2.91e-01 77.0% 32.9%
3kzqA00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.54 38.0 2.70e-01 77.0% 56.3%
6a3kA00 1.20.120.10 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Cytochrome c/b562 0.53 43.0 3.49e-01 95.1% 99.2%
3d5lB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.53 36.0 3.12e-01 70.5% 52.9%
3jz0A02 1.20.120.330 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2 0.52 46.0 3.60e-01 100.0% 70.8%
3mbdA00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.52 42.0 2.73e-01 96.7% 31.8%
ECOD (44)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3195802 109.3.1.186 alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank, Ank_5 0.77 66.0 4.32e-01 95.1% 25.0%
4019164 109.3.1.218 alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank_KRIT1 0.77 66.0 4.69e-01 96.7% 43.2%
3435482 109.4.1.420 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR 0.77 67.0 4.41e-01 98.4% 25.2%
3649419 109.4.1.1525 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, DYW_deaminase 0.75 64.0 3.96e-01 98.4% 17.1%
3447761 109.4.1.1269 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, E_motif 0.74 63.0 4.58e-01 95.1% 39.4%
3680212 109.4.1.1525 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, DYW_deaminase 0.73 63.0 3.88e-01 98.4% 17.1%
3672161 109.4.1.1254 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, E_motif 0.73 62.0 3.94e-01 95.1% 23.7%
3424708 109.4.1.1269 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, E_motif 0.72 62.0 4.74e-01 96.7% 47.1%
5015099 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.72 62.0 4.30e-01 98.4% 32.4%
3373809 109.4.1.1269 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, E_motif 0.71 61.0 4.56e-01 96.7% 47.1%
3647434 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.71 59.0 5.05e-01 93.4% 64.0%
3457720 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.71 59.0 4.71e-01 91.8% 50.8%
3383769 109.4.1.1273 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_3 0.71 61.0 4.07e-01 98.4% 26.1%
3291349 109.4.1.194 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_10 0.70 58.0 3.55e-01 95.1% 18.0%
3828651 109.4.1.621 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR_3 0.69 56.0 4.53e-01 93.4% 52.0%
3440330 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.68 56.0 3.64e-01 95.1% 24.0%
3962443 109.3.1.0 alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat 0.67 55.0 4.20e-01 98.4% 78.8%
3813220 109.4.1.1293 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_1 0.66 54.0 3.63e-01 95.1% 25.2%
3421937 109.4.1.883 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 0.66 55.0 3.74e-01 96.7% 28.9%
3315437 109.4.1.1261 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR_1, PPR_2, PPR_long 0.66 56.0 3.81e-01 98.4% 34.0%
3300581 109.59.1.0 alpha superhelices › Repetitive alpha hairpins › Intraflagellar transport protein 80 (IFT80) C-terminal domain › Intraflagellar transport protein 80 (IFT80) C-terminal domain 0.64 53.0 3.95e-01 98.4% 46.9%
3229584 226.1.1.1 a+b two layers › POZ domain › POZ domain › POZ domain › BTB 0.64 50.0 3.72e-01 85.2% 38.7%
2944 4198.1.1.1 alpha arrays › TerB-like › TerB-like › TerB-like › TerB 0.63 48.0 3.66e-01 86.9% 63.7%
3184680 109.4.1.31 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › MA3 0.63 51.0 3.48e-01 95.1% 38.8%
4018342 150.1.1.0 alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin 0.61 44.0 3.72e-01 78.7% 61.8%
3498203 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.60 50.0 3.54e-01 98.4% 45.0%
4256018 604.12.1.5 alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › SUV3_C 0.60 43.0 3.89e-01 77.0% 81.2%
4543408 101.35.1.5 alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX › RecX_HTH1 0.59 42.0 4.22e-01 77.0% 93.3%
3935620 131.2.1.3 alpha complex topology › PDEase-like › Poly A polymerase C-terminal region-like › Poly A polymerase C-terminal region-like › PolyA_pol_RNAbd 0.59 47.0 3.09e-01 88.5% 26.4%
6834 316.2.1.1 a+b three layers › Nucleotidyltransferase-like › Rv2827c C-terminal domain-like › Rv2827c C-terminal domain-like › AbiEi_1 0.58 48.0 3.43e-01 96.7% 64.1%
3258130 101.1.2.119 alpha arrays › HTH › HTH › winged helix domain › Tau95 0.57 40.0 3.01e-01 75.4% 46.1%
3520270 101.35.1.5 alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX › RecX_HTH1 0.57 39.0 3.36e-01 73.8% 85.7%
4148226 101.35.1.5 alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX › RecX_HTH1 0.56 38.0 3.26e-01 72.1% 48.2%
5076728 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.56 48.0 3.02e-01 96.7% 26.9%
4440593 101.35.1.1 alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX › RecX_HTH2 0.56 38.0 4.14e-01 72.1% 92.0%
4972832 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.55 39.0 3.83e-01 78.7% 92.9%
5007881 101.1.2.181 alpha arrays › HTH › HTH › winged helix domain › MCM_C 0.54 39.0 3.54e-01 78.7% 71.1%
3896790 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.54 42.0 3.98e-01 86.9% 77.3%
4991298 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.54 38.0 3.61e-01 78.7% 80.0%
3672432 109.46.1.11 alpha superhelices › Repetitive alpha hairpins › Helical domain in TOPLESS related protein 2 (TPR2) › Helical domain in TOPLESS related protein 2 (TPR2) › WD40, Beta-prop_IFT122_1st 0.52 42.0 2.60e-01 98.4% 25.1%
4930318 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.52 36.0 2.93e-01 75.4% 89.2%
3785576 101.1.2.24 alpha arrays › HTH › HTH › winged helix domain › MAGE 0.51 35.0 3.01e-01 75.4% 73.3%
4966803 101.1.2.948 alpha arrays › HTH › HTH › winged helix domain › PF27297 0.51 35.0 3.24e-01 75.4% 68.9%
5047067 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.51 38.0 3.48e-01 83.6% 95.3%