←Back to structures

ankyrin_repeat_domain

Euk-Vir

Pandoravirus_salinus

ankyrin_repeat_domain__YP_008438146__Pandoravirus_salinus__1349410

Identity

Accession:: YP_008438146 ↗
Protein ID:: ankyrin_repeat_domain
Kingdom:: euk

Quality

73.4 mean pLDDT

Taxonomy

Pandoravirus› Pandoravirus_salinus

TaxID: 1349410

Cluster

View cluster (92 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 60-132

PDB

Domain cluster: representative

CATH (3)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3kkbA00	1.20.120.880	Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Histidine kinase (KinB), sensor domain	0.58	41.0	3.50e-01	75.3%	62.7%
7zm7601	1.20.120.1200	Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › NADH-ubiquinone/plastoquinone oxidoreductase chain 6, subunit NuoJ	0.52	34.0	2.73e-01	71.2%	29.3%
8gi9A01	1.20.1070.10	Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins	0.51	41.0	2.99e-01	93.2%	75.3%

ECOD (15)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3439829	145.1.1.3 ↗	alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like	0.83	62.0	5.72e-01	94.5%	63.3%
3837508	145.1.1.0 ↗	alpha arrays › F-box domain › F-box domain › F-box domain	0.82	54.0	6.40e-01	98.6%	100.0%
3685791	145.1.1.3 ↗	alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like	0.79	55.0	6.22e-01	72.6%	98.2%
3466016	145.1.1.3 ↗	alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like	0.76	51.0	5.19e-01	72.6%	71.4%
3184851	145.1.1.3 ↗	alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like	0.76	54.0	5.13e-01	94.5%	63.5%
3448206	145.1.1.3 ↗	alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like	0.75	49.0	5.44e-01	72.6%	87.3%
3924438	145.1.1.0 ↗	alpha arrays › F-box domain › F-box domain › F-box domain	0.74	49.0	5.48e-01	72.6%	89.1%
3209345	109.4.1.0 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat	0.73	64.0	4.39e-01	95.9%	69.2%
3698257	145.1.1.3 ↗	alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like	0.72	53.0	5.15e-01	78.1%	93.8%
4012180	145.1.1.0 ↗	alpha arrays › F-box domain › F-box domain › F-box domain	0.72	53.0	4.24e-01	78.1%	56.4%
3200510	145.1.1.3 ↗	alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like	0.71	62.0	5.64e-01	94.5%	83.2%
3209933	145.1.1.0 ↗	alpha arrays › F-box domain › F-box domain › F-box domain	0.71	63.0	4.25e-01	98.6%	40.5%
3725732	145.1.1.1 ↗	alpha arrays › F-box domain › F-box domain › F-box domain › F-box	0.70	54.0	5.23e-01	90.4%	75.0%
3658111	145.1.1.26 ↗	alpha arrays › F-box domain › F-box domain › F-box domain › LRR_6, DUF7885	0.62	54.0	3.14e-01	95.9%	21.9%
3916212	109.4.1.1796 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_8, HAT_Syf1_M, HAT_Syf1_CNRKL1_C	0.61	50.0	3.56e-01	93.2%	47.7%

D2 medium residues 133-162_182-267

PDB

Domain cluster: rep: Ankyrin_repeat_domain_containing_protein__YP_009482714__Pandoravirus_quercus__2107709__D78-176

Pfam (2)

Accession	Name	Score	E-value	Q cov	HMM cov
PF12796.14 best	Ank_2	34.2	4.20e-08	69.8%	87.8%
PF13637.13	Ank_4	32.0	1.70e-07	38.8%	100.0%

D3 medium residues 268-351

PDB

Domain cluster: rep: ankyrin_repeat_protein__YP_009119394__Pandoravirus_inopinatum__1605721__D276-338