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ankyrin_repeat_domain

Euk-Vir

Pandoravirus_salinus

ankyrin_repeat_domain__YP_008438314__Pandoravirus_salinus__1349410

Identity

Accession:
YP_008438314 ↗
Protein ID:
ankyrin_repeat_domain
Kingdom:
euk

Quality

75.4 mean pLDDT

Taxonomy

Pandoravirus› Pandoravirus_salinus

TaxID: 1349410

Cluster

View cluster (144 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 193-331
PDB
Domain cluster: rep: Ankyrin_repeat_domain_containing_protein__YP_009481820__Pandoravirus_neocaledonia__2107708__D274-402
Pfam (2)
AccessionNameScoreE-valueQ covHMM cov
PF13637.13 best Ank_4 30.3 5.70e-07 32.4% 94.0%
PF13637.13 Ank_4 23.4 8.00e-05 32.4% 94.0%
D2 medium residues 332-398
PDB
Domain cluster: representative
CATH (46)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
5cecB00 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.80 61.0 4.29e-01 80.6% 33.2%
3ehrA02 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.80 59.0 4.90e-01 79.1% 58.6%
5eidA00 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.79 60.0 4.83e-01 80.6% 54.5%
3b7bB00 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.78 59.0 4.02e-01 80.6% 31.2%
2zgdA00 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.78 59.0 5.16e-01 80.6% 67.0%
5ja4D00 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.76 57.0 4.41e-01 80.6% 45.6%
3ljnA00 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.75 64.0 4.04e-01 91.0% 30.3%
3t8kA00 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.70 51.0 3.77e-01 79.1% 38.6%
4qfvC02 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.69 58.0 5.93e-01 91.0% 93.8%
3f8mA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.64 45.0 4.55e-01 74.6% 98.5%
2i2xB01 1.10.1240.10 Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › Methionine synthase domain 0.63 53.0 4.64e-01 92.5% 81.0%
1gkuB06 1.10.460.10 Mainly Alpha › Orthogonal Bundle › Topoisomerase I; domain 2 › Topoisomerase I, domain 2 0.60 41.0 3.20e-01 71.6% 43.6%
1i7dA02 1.10.460.10 Mainly Alpha › Orthogonal Bundle › Topoisomerase I; domain 2 › Topoisomerase I, domain 2 0.60 41.0 3.07e-01 71.6% 48.3%
4etsA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.59 41.0 3.83e-01 73.1% 73.6%
2va8A03 1.10.3380.30 Mainly Alpha › Orthogonal Bundle › Sec63 N-terminal domain-like fold › 0.58 41.0 2.95e-01 77.6% 91.0%
2v6eA04 1.10.10.2040 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.57 43.0 3.98e-01 85.1% 73.1%
3pfiA03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.57 38.0 3.76e-01 70.1% 84.9%
1lnwF01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.57 39.0 3.26e-01 71.6% 47.6%
2bgcA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.57 39.0 3.45e-01 71.6% 72.3%
3ecoB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.57 39.0 3.21e-01 71.6% 47.3%
1d8jA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.56 41.0 3.88e-01 77.6% 91.4%
1mw9X02 1.10.460.10 Mainly Alpha › Orthogonal Bundle › Topoisomerase I; domain 2 › Topoisomerase I, domain 2 0.56 39.0 2.99e-01 71.6% 41.7%
1xmxA03 1.10.10.680 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Hypothetical protein VC1899 (Restriction endonuclease-like) 0.56 39.0 3.66e-01 76.1% 67.4%
5y2vC01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.55 38.0 3.55e-01 71.6% 67.1%
1bjaA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.55 38.0 3.44e-01 71.6% 63.2%
3go5A04 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.55 37.0 3.77e-01 70.1% 98.4%
1r7jA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.55 37.0 3.49e-01 73.1% 65.6%
3f5fA02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.55 46.0 2.97e-01 89.6% 90.6%
6hwjA01 3.90.1200.10 Alpha Beta › Alpha-Beta Complex › Aminoglycoside 3'-phosphotransferase; Chain: A, domain 2 › Aminoglycoside phosphotransferase (APH), C-terminal lobe 0.54 45.0 3.18e-01 98.5% 83.3%
2esnA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.54 37.0 3.44e-01 71.6% 64.0%
1in4A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.54 37.0 3.70e-01 74.6% 90.4%
1y0uA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.54 36.0 3.35e-01 70.1% 62.9%
4fymF00 3.40.50.2020 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.53 46.0 3.25e-01 95.5% 78.0%
7febA03 3.40.50.12790 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › FHIPEP family, domain 4 0.53 39.0 3.59e-01 80.6% 83.7%
3dp7B01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.53 36.0 3.30e-01 70.1% 64.5%
1yg2A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.53 37.0 3.57e-01 74.6% 84.8%
3mczA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.53 38.0 3.58e-01 76.1% 76.8%
7pzaA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.53 35.0 3.35e-01 70.1% 84.9%
1lvaA04 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.53 36.0 3.72e-01 71.6% 96.7%
2x4hA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.52 36.0 2.98e-01 71.6% 48.8%
5hvqC02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.52 37.0 3.34e-01 76.1% 72.4%
4a17H02 3.30.60.300 Alpha Beta › 2-Layer Sandwich › Wheat Germ Agglutinin (Isolectin 2); domain 1 › 0.52 29.0 3.39e-01 95.5% 87.2%
5cvrA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.51 34.0 3.30e-01 71.6% 84.5%
3qyfA03 1.10.10.1690 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Uncharacterised CRISPR-associated protein family, UPF0236 0.50 35.0 3.61e-01 73.1% 83.6%
1g8xA06 1.20.58.60 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.50 38.0 2.55e-01 86.6% 32.3%
3vsjD00 3.40.830.10 Alpha Beta › 3-Layer(aba) Sandwich › Protocatechuate 4,5-dioxygenase; Chain B › LigB-like 0.50 39.0 2.61e-01 86.6% 35.8%
ECOD (55)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4306725 109.3.1.20 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank_2,Ank_4 0.95 68.0 4.38e-01 74.6% 20.8%
3252038 109.3.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat 0.92 63.0 4.76e-01 71.6% 34.5%
3252035 109.3.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat 0.86 65.0 4.77e-01 79.1% 41.2%
3267275 109.3.1.2 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank,Ank_2 0.86 66.0 4.64e-01 80.6% 30.3%
3259553 109.3.1.20 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank_2,Ank_4 0.79 70.0 4.35e-01 92.5% 30.0%
3325890 109.3.1.2 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank,Ank_2 0.69 62.0 4.69e-01 100.0% 91.6%
3353864 101.1.2.212 ↗ alpha arrays › HTH › HTH › winged helix domain › Cac1_C 0.65 46.0 4.55e-01 74.6% 88.6%
4998411 4995.1.1.1 ↗ alpha arrays › Methionine synthase domain-like › Methionine synthase domain-like › Methionine synthase domain-like › B12-binding_2 0.64 52.0 5.09e-01 89.6% 100.0%
3657853 101.1.1.210 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Cac1_C 0.64 45.0 4.65e-01 74.6% 93.8%
3390933 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.63 44.0 4.19e-01 73.1% 91.3%
4984709 4995.1.1.1 ↗ alpha arrays › Methionine synthase domain-like › Methionine synthase domain-like › Methionine synthase domain-like › B12-binding_2 0.63 52.0 4.94e-01 92.5% 100.0%
3390533 4.8.1.19 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like › WAC_Acf1_DNA_bd 0.62 42.0 3.25e-01 71.6% 82.5%
3946422 101.1.2.1 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_1 0.59 40.0 3.78e-01 71.6% 67.1%
4969033 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.59 41.0 3.06e-01 73.1% 39.4%
3881443 101.1.2.309 ↗ alpha arrays › HTH › HTH › winged helix domain › GPAT_C 0.59 43.0 2.93e-01 82.1% 27.9%
4973149 2002.1.1.120 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM 0.57 44.0 2.88e-01 88.1% 63.7%
5078903 101.1.2.927 ↗ alpha arrays › HTH › HTH › winged helix domain › DUF7347 0.56 38.0 3.27e-01 71.6% 48.3%
4979152 101.1.2.927 ↗ alpha arrays › HTH › HTH › winged helix domain › DUF7347 0.56 39.0 3.58e-01 74.6% 62.1%
5055754 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.56 40.0 3.55e-01 77.6% 64.8%
5073482 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.56 39.0 3.91e-01 76.1% 84.3%
5047360 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.56 39.0 3.38e-01 73.1% 59.0%
3275918 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.56 38.0 3.85e-01 74.6% 98.6%
4969567 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.55 39.0 3.67e-01 74.6% 72.9%
4970540 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.55 39.0 3.54e-01 74.6% 70.5%
5017858 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.55 38.0 3.03e-01 73.1% 37.2%
3398923 101.1.2.248 ↗ alpha arrays › HTH › HTH › winged helix domain › DUF4777 0.55 39.0 3.71e-01 74.6% 87.5%
5044812 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.55 40.0 2.86e-01 79.1% 77.8%
3279300 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.55 39.0 3.03e-01 76.1% 46.3%
5048731 101.1.2.927 ↗ alpha arrays › HTH › HTH › winged helix domain › DUF7347 0.55 38.0 3.51e-01 74.6% 63.2%
5022256 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.54 39.0 3.64e-01 79.1% 80.0%
3818924 109.4.1.1475 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PF27629 0.54 42.0 2.95e-01 88.1% 39.6%
3270163 101.1.2.303 ↗ alpha arrays › HTH › HTH › winged helix domain › RPC5 0.54 40.0 4.23e-01 80.6% 100.0%
3489856 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.54 37.0 3.58e-01 73.1% 88.7%
3981167 4995.1.1.3 ↗ alpha arrays › Methionine synthase domain-like › Methionine synthase domain-like › Methionine synthase domain-like › MlrA_helical 0.54 45.0 4.40e-01 92.5% 98.7%
3805792 101.1.2.137 ↗ alpha arrays › HTH › HTH › winged helix domain › OST-HTH 0.54 40.0 3.81e-01 79.1% 91.3%
4997427 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.54 38.0 3.52e-01 74.6% 68.9%
3740381 101.1.2.385 ↗ alpha arrays › HTH › HTH › winged helix domain › HRQ1_WHD 0.54 36.0 3.58e-01 71.6% 70.7%
3293296 101.1.2.10 ↗ alpha arrays › HTH › HTH › winged helix domain › Linker_histone 0.54 37.0 3.71e-01 73.1% 100.0%
3982788 101.1.2.89 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_DeoR 0.53 38.0 3.83e-01 77.6% 90.0%
3740394 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.53 36.0 3.07e-01 70.1% 55.5%
4206579 101.1.2.1 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_1 0.53 36.0 3.29e-01 71.6% 60.0%
3780237 101.1.2.265 ↗ alpha arrays › HTH › HTH › winged helix domain › Stork_head 0.53 37.0 2.81e-01 74.6% 40.5%
5057164 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.53 37.0 3.32e-01 74.6% 73.0%
3217621 101.1.2.265 ↗ alpha arrays › HTH › HTH › winged helix domain › Stork_head 0.53 36.0 3.58e-01 70.1% 100.0%
3837457 101.1.2.303 ↗ alpha arrays › HTH › HTH › winged helix domain › RPC5 0.53 44.0 4.49e-01 94.0% 100.0%
3587524 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.52 37.0 3.37e-01 77.6% 76.0%
3276654 101.1.2.309 ↗ alpha arrays › HTH › HTH › winged helix domain › GPAT_C 0.52 37.0 2.53e-01 77.6% 27.5%
3754703 101.1.2.402 ↗ alpha arrays › HTH › HTH › winged helix domain › wHTH_TTC3 0.52 38.0 3.24e-01 82.1% 61.6%
3407956 101.1.2.265 ↗ alpha arrays › HTH › HTH › winged helix domain › Stork_head 0.52 37.0 2.83e-01 79.1% 40.0%
4268455 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.52 35.0 3.35e-01 71.6% 67.1%
5031567 316.1.1.2 ↗ a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › NTP_transf_2 0.52 42.0 3.41e-01 92.5% 70.4%
5013813 242.1.1.7 ↗ a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 0.52 40.0 3.15e-01 86.6% 76.7%
3618490 101.1.2.416 ↗ alpha arrays › HTH › HTH › winged helix domain › WH_Egal 0.52 38.0 3.51e-01 83.6% 85.3%
3401123 101.1.2.248 ↗ alpha arrays › HTH › HTH › winged helix domain › DUF4777 0.51 36.0 3.58e-01 77.6% 94.7%
4361463 101.19.1.1 ↗ alpha arrays › HTH › C-terminal subdomain in oxygen-independent coproporphyrinogen III oxidase HemN › C-terminal subdomain in oxygen-independent coproporphyrinogen III oxidase HemN › HemN_C 0.51 36.0 3.24e-01 77.6% 71.0%