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ankyrin_repeat_domain
Euk-VirPandoravirus_salinus
ankyrin_repeat_domain__YP_008438756__Pandoravirus_salinus__1349410
Identity
- Accession:
- YP_008438756 ↗
- Protein ID:
- ankyrin_repeat_domain
- Kingdom:
- euk
Quality
83.1
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 294-356
Domain cluster:
representative
CATH (2)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4dllB02 | 1.10.1040.10 | Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 | 0.60 | 45.0 | 3.71e-01 | 85.7% | 82.3% |
| 2j0jA02 | 1.20.80.10 | Mainly Alpha › Up-down Bundle › Acyl-CoA Binding Protein › | 0.55 | 44.0 | 3.64e-01 | 92.1% | 64.8% |
ECOD (3)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3661146 | 109.4.1.1262 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_1, PPR_2, PPR_long | 0.63 | 54.0 | 4.04e-01 | 98.4% | 40.0% |
| 3354033 | 109.4.1.1279 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_1, PPR_2, PPR_long, TPR_24 | 0.62 | 47.0 | 3.44e-01 | 87.3% | 31.5% |
| 3760371 | 109.27.1.1 ↗ | alpha superhelices › Repetitive alpha hairpins › BACK domain › BACK domain › BACK | 0.60 | 53.0 | 4.12e-01 | 100.0% | 51.4% |
D2
medium
residues 1-106
Domain cluster:
rep: F-box_domain_protein__YP_009120021__Pandoravirus_inopinatum__1605721__D14-160
CATH (1)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1k3kA00 | 1.10.437.10 | Mainly Alpha › Orthogonal Bundle › Apoptosis Regulator Bcl-x › Blc2-like | 0.53 | 41.0 | 3.76e-01 | 84.0% | 65.1% |
ECOD (2)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4400236 | 170.1.1.0 ↗ | alpha bundles › Retrovirus capsid protein › Retrovirus capsid protein-C › Retrovirus capsid protein-C | 0.52 | 37.0 | 3.79e-01 | 73.6% | 93.3% |
| 3228543 | 109.4.1.370 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Symplekin_C | 0.51 | 44.0 | 3.39e-01 | 99.1% | 43.4% |