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ankyrin_repeat_domain
Euk-VirPandoravirus_salinus
ankyrin_repeat_domain__YP_009430125__Pandoravirus_salinus__1349410
Identity
- Accession:
- YP_009430125 ↗
- Protein ID:
- ankyrin_repeat_domain
- Kingdom:
- euk
Quality
74.2
mean pLDDT
Cluster
View cluster (21 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 31-97
Domain cluster:
rep: Ankyrin_repeat_domain_containing_protein__YP_009483670__Pandoravirus_quercus__2107709__D29-93
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF12937.13 best | F-box-like | 34.9 | 1.50e-08 | 62.7% | 87.2% |
| PF00646.39 | F-box | 25.7 | 1.10e-05 | 59.7% | 83.7% |
D2
medium
residues 161-243
Domain cluster:
representative
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3r2cA00 | 1.10.940.10 | Mainly Alpha › Orthogonal Bundle › N-utilizing Substance Protein B Homolog; Chain A › NusB-like | 0.65 | 45.0 | 3.86e-01 | 72.3% | 95.7% |
| 4dloB02 | 1.25.40.610 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.60 | 49.0 | 4.49e-01 | 94.0% | 94.0% |
| 2hcmA01 | 3.90.190.10 | Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily | 0.59 | 46.0 | 3.92e-01 | 88.0% | 79.9% |
| 7c1iA01 | 1.20.120.160 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › HPT domain | 0.52 | 35.0 | 3.36e-01 | 91.6% | 59.0% |
ECOD (14)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3297097 | 109.4.1.420 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR | 0.70 | 62.0 | 5.77e-01 | 100.0% | 87.6% |
| 3306533 | 109.4.1.420 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR | 0.70 | 61.0 | 5.78e-01 | 100.0% | 91.0% |
| 3432136 | 109.4.1.1256 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, PPR_3 | 0.69 | 61.0 | 4.95e-01 | 100.0% | 53.8% |
| 3298490 | 109.4.1.189 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR_2 | 0.69 | 60.0 | 5.47e-01 | 100.0% | 77.4% |
| 3840772 | 109.4.1.420 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR | 0.69 | 61.0 | 4.49e-01 | 100.0% | 39.6% |
| 3803780 | 109.4.1.883 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 | 0.69 | 60.0 | 5.64e-01 | 100.0% | 80.0% |
| 3442055 | 109.4.1.1254 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, E_motif | 0.69 | 60.0 | 4.19e-01 | 100.0% | 31.2% |
| 3442732 | 109.4.1.1269 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, E_motif | 0.67 | 59.0 | 5.16e-01 | 100.0% | 66.9% |
| 3810357 | 109.4.1.1371 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, Eplus_motif, E_motif | 0.67 | 59.0 | 3.85e-01 | 100.0% | 23.7% |
| 3830692 | 109.4.1.1256 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, PPR_3 | 0.66 | 57.0 | 4.57e-01 | 100.0% | 55.4% |
| 3256816 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.62 | 53.0 | 4.39e-01 | 95.2% | 68.0% |
| 3993662 | 226.1.1.1 ↗ | a+b two layers › POZ domain › POZ domain › POZ domain › BTB | 0.57 | 49.0 | 4.11e-01 | 100.0% | 63.2% |
| 168371 | 2006.1.1.18 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › HAD_2 | 0.55 | 41.0 | 3.11e-01 | 81.9% | 63.3% |
| 5066687 | 187.1.1.0 ↗ | alpha arrays › alpha-helical ferredoxin-like › alpha-helical ferredoxin › alpha-helical ferredoxin | 0.54 | 46.0 | 3.90e-01 | 92.8% | 60.7% |